Choristoneura fumiferana (eastern spruce budworm): 141427957
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Entry
141427957 CDS
T11020
Name
(RefSeq) uncharacterized protein
KO
K13128
zinc finger CCHC domain-containing protein 8
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfum03041
]
141427957
Spliceosome [BR:
cfum03041
]
Complex C
Other components
Complex C specific factors
141427957
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PSP
Motif
Other DBs
NCBI-GeneID:
141427957
NCBI-ProteinID:
XP_073943672
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Position
5:complement(5367892..5377304)
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AA seq
785 aa
AA seq
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MSKRKAGVNDIIYELDNDDIELSSEDEGKQPKINRQEPKLDSEATREQTIDEQTASECTN
VDCSDDTIVIEASPVKANNGGKSSSNVIENNVEDEPPVKIEVDNNDKQNTVGSKMTILDE
DIVVDSPASNTDLGVVGCENRTPLFTVRFKDKKVAKVYKDKIKAFMLKLIRIHDEEALEG
SENDTDLELDIWPEDLQEADIELAQTPKPEPQEPEEQDNIFFIDTDPSAQEATDIPRYRQ
TSTLICNSPVKEATTSPTVFRRGPTCFNCDGAHSLRDCTLPRDHNRIADKRKMMVKVGRY
HVEDDQKYGHLVPGRISGNLRHALGLKRNELPLYIYRMRMLGYPPGWLEEARISHSGITM
FDSSGSAIRDPEEEEGEVSEPGSKDKFDIKKILDFPGFNVPASSRYREEAHILGLPPLSE
QDSKIAMLQMLVPNAMKAYKRKKLTFFPSAGKVTNQDGQAEMELDSGDEIVEFPSVPPLP
DDVPPPPPPPPETPPPPPKSPPPPNPPPPPKSTPSHMKSPGIPQSDNPDTVKKDESDNAE
DDLKIVKVTELKDIPLPEDTSHITIEDDEINKSELTLERSVRGSPSLDDLEEKKRLLLNA
LESDVTLPNSPNVSIAGNISEKEIEISDDAQSDAVSRDTKMESDIEVVTDSEAKEDEAVK
TDDDVVMSDDANTKDVESDDPTPIEKDDTNESNKDVESSSRRNSQANGNRTPTTEAKRIV
KTTLYGTPVMNIASPYVKLPSDDKFAKDICDVINFENLPNSTGKYKKICSLLKKVKSEVD
RIQDS
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaggaaggccggagtaaacgatatcatttatgaattggacaatgatgatatc
gaacttagtagtgaagatgaaggtaaacaacctaaaattaatcgacaggagccgaaactt
gactctgaagccactcgcgaacaaacaattgatgaacaaactgcctcagaatgcaccaat
gttgactgttccgatgatacaatcgtgatagaagcttcacctgttaaagccaataatgga
gggaaaagtagttccaacgtaattgaaaataacgtcgaagacgaaccaccagtgaaaatt
gaggtcgataataacgacaaacaaaataccgttgggtcaaaaatgacaatattagacgag
gacattgtagtagattcccctgcctcaaatacagacttaggtgttgttggatgtgaaaac
aggacgcctctgttcacagtgcgctttaaggacaagaaagtggctaaagtttacaaagac
aaaataaaagctttcatgttaaaacttatacgaattcatgacgaagaagctcttgagggt
tctgagaatgacactgacttggagctggatatttggccagaagacttgcaagaagctgat
attgaactggcccagactccaaagccagaaccacaggagccagaggagcaagacaatatc
ttctttattgatactgacccatcagcgcaagaagctactgacatacccagatatagacag
acttctaccttaatatgtaattctcctgtgaaagaggccaccacctctcctaccgtgttc
cgccgaggtcccacctgtttcaactgtgatggagctcactctttgagagactgcactctg
cctcgagaccataataggattgctgataaacggaaaatgatggtgaaagttggacggtat
catgtggaagatgaccagaaatatggccacctggtcccaggcaggatatctggcaacctc
aggcatgcgcttgggctcaagaggaatgaattaccgctgtatatttaccgcatgcggatg
ttggggtatccgcctggctggctggaggaggctaggatatcacactccgggatcaccatg
tttgatagcagtggaagtgcaatacgggacccagaagaggaggaaggggaggtgagcgag
cctggctccaaggacaagtttgatattaagaagatactcgacttccctgggttcaatgtg
cccgctagctcgcgatacagagaggaagctcacatactaggcctgcctccattgtcagag
caggacagcaagatagccatgctgcagatgctggtgcctaacgcaatgaaggcgtacaag
cgaaagaagctcactttcttcccttcagccgggaaagtgactaatcaggatgggcaggct
gagatggagttagacagtggcgatgaaatagtagagttcccatcagtaccgccactgcca
gacgacgtgcccccaccaccgccgcctcctcctgaaacacccccaccccctccaaaatca
ccgccacccccaaatccaccaccccctcctaaatcaactccttcacatatgaaatcccca
ggaatacctcaatctgacaaccctgatacagttaagaaagacgaatctgacaatgctgaa
gatgatttaaaaatagtaaaagtgactgaactgaaagatataccactgcctgaggatact
tcacatatcactattgaagatgatgaaattaataagtctgaactaacactcgaacgtagc
gtacgaggtagtccgtctttagacgacttagaggagaaaaagcggcttttgctcaatgct
ctagagagcgatgtaacgttacccaactcaccgaacgtatccatagcagggaatatcagt
gagaaggaaatagagataagtgacgatgctcaaagcgatgctgtaagtcgagatactaaa
atggaatccgacattgaagtcgtaactgactctgaagctaaagaagacgaagcagttaaa
accgatgatgatgtggttatgtctgatgatgcaaacactaaagatgtcgagtctgatgac
cctacgccaattgaaaaagatgatacaaatgagtctaacaaagacgtagaaagttcaagt
agaagaaattcacaagcaaatggtaacagaacgcctaccacagaagccaagaggatagtc
aagacaactttgtacggaacgcctgtcatgaatatagctagcccttacgtcaagttaccg
agtgacgataagttcgcgaaggacatttgtgacgtcataaacttcgagaacctacccaac
tcgaccggcaagtacaagaaaatatgtagtctgttgaaaaaagttaaaagcgaagttgac
aggatacaagactcgtga
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