Choristoneura fumiferana (eastern spruce budworm): 141427989
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Entry
141427989 CDS
T11020
Symbol
Sbds
Name
(RefSeq) SBDS ribosome maturation factor
KO
K14574
ribosome maturation protein SDO1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141427989 (Sbds)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfum03009
]
141427989 (Sbds)
Ribosome biogenesis [BR:
cfum03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
141427989 (Sbds)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
YgzA
Motif
Other DBs
NCBI-GeneID:
141427989
NCBI-ProteinID:
XP_073943727
LinkDB
All DBs
Position
5:complement(6019323..6020462)
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AA seq
251 aa
AA seq
DB search
MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVISWRNKVEKDIDEVLQTNTVFTN
VSKGQVAKKEDLVKIFSKEDLTEICKEILEKGELQVSDKERHSQIDSLFKDIATTVADKC
INPETKRPYPVSIIEKAMKDIHFSVNVNKNAKQQALDVIQLLKKEIPLERAQMRVRILLT
GKDARKTKEKVVKLTTSVEEESWDSGNANIICLIDPGNFRSLDELVRTETKGSGQFELLN
LKEMVEGEQAL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatattcacacccactaaccaaattcgactgacgaatgttgcgatagtaagg
ttaaagaaaggtggcaaaagatttgaaatagcatgttataaaaacaaagtaatttcatgg
agaaataaagtagagaaggatattgatgaagttctacaaactaacacagtgtttacaaac
gtttccaaagggcaagtagcaaagaaagaggacctggtaaagatattttctaaggaagat
ttaactgaaatatgtaaagaaatattggaaaagggtgagcttcaagtatcagacaaagaa
agacattctcaaatagactctttgttcaaagatattgctacgaccgtagctgataaatgc
attaatccagagaccaagaggccataccctgtttctattatagagaaggctatgaaagat
attcatttttctgtaaatgtcaataaaaatgcaaagcaacaagcccttgatgtcattcaa
ttactgaaaaaagaaattcctcttgaaagagcacaaatgagagtcagaattcttctgact
ggtaaggatgcacggaaaactaaggagaaggtagtcaagttaaccaccagtgttgaagaa
gaaagctgggattctgggaatgctaacattatttgcttaattgatcccggaaattttaga
agtctagatgaacttgttagaacagaaacaaaaggcagcggccagtttgaattactgaat
ttaaaggagatggttgaaggagaacaagcgttgtaa
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