Choristoneura fumiferana (eastern spruce budworm): 141428009
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Entry
141428009 CDS
T11020
Name
(RefSeq) syntaxin-1A-like isoform X1
KO
K04560
syntaxin 1A
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
141428009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141428009
Membrane trafficking [BR:
cfum04131
]
SNARE
Syntaxin (Qa)
Stx-PM
141428009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
YtxH
AAA_13
Branch
TraF_2
Spectrin_Anc-1
Lzipper-MIP1
FUSC
MRC1
Motif
Other DBs
NCBI-GeneID:
141428009
NCBI-ProteinID:
XP_073943768
LinkDB
All DBs
Position
5:6902961..6993559
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AA seq
306 aa
AA seq
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MTKDRLAALQAAQSDDDDVGPDDVNVAVEESPMTEFFGEVEEIREMIDKIQANVEEVKKK
HSAILSAPQSDEKTKNELEDLMADIKKTANKVRGKLKHIEQNIEQEEHSNKSSADLRIRK
TQHSTLSRKFVEVMTEYNRTQTDYRDRCKNRILRQLEITGRNTTDEELETMLEQDNPAVF
TQGIIMETQQAKQTLADIEARHADIIKLETSIRELHDMFMDMAMLVESQGEMIDRIEYHV
EHAVDYVQTATQDTKKALKYQSKARRVSSLFQYGSFVANAFLFCLSPFPRPCVPLPVPPC
YVTIRL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggacaggttagcggcgcttcaagcggcgcaaagcgacgatgacgacgtcggc
cccgacgacgtcaacgtcgctgttgaagaaagtcccatgaccgaattcttcggtgaggtg
gaggagatacgagagatgatagacaagattcaagcaaacgtcgaggaggtcaagaagaag
cacagcgccatcctatcagcaccgcaatcagatgaaaaaacaaagaacgaattagaagat
ctcatggctgacattaagaaaactgctaacaaagtcagaggaaagttaaaacacatagag
cagaacatcgaacaggaggagcactctaacaaatcgtcggcggatctcaggataagaaag
acacagcactcgaccctctcgcgcaagttcgtcgaggttatgaccgagtacaaccgcacg
cagaccgactaccgggaccggtgcaaaaaccggatactccggcaactcgagatcaccggc
cgcaacaccacggacgaggagttggagaccatgctcgagcaggataaccctgctgtcttc
actcaagggatcataatggagacgcagcaagcgaagcagacgttggccgacatcgaagcg
cggcacgccgacatcatcaagctggagacgtccatccgcgagctgcacgacatgttcatg
gacatggcgatgcttgtcgagagccagggagagatgatcgaccgcattgagtatcatgta
gagcacgctgtggactatgtccaaactgccacgcaagacacaaagaaggccctaaaatat
cagagcaaagctcgacgggtgagttcattattccagtacggctcattcgttgctaatgcg
tttttgttttgtttgtccccctttccccgcccgtgcgtcccactccctgtcccaccctgt
tatgttacgatacgtttgtga
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