Choristoneura fumiferana (eastern spruce budworm): 141428013
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Entry
141428013 CDS
T11020
Symbol
CLIP-190
Name
(RefSeq) cytoplasmic linker protein 190 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
141428013 (CLIP-190)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfum03036
]
141428013 (CLIP-190)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cfum04812
]
141428013 (CLIP-190)
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
141428013 (CLIP-190)
Cytoskeleton proteins [BR:
cfum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
141428013 (CLIP-190)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
BRE1
Motif
Other DBs
NCBI-GeneID:
141428013
NCBI-ProteinID:
XP_073943787
LinkDB
All DBs
Position
5:complement(7115558..7171599)
Genome browser
AA seq
1739 aa
AA seq
DB search
MPVETKISFSDGSSSDAVRKLSDDLSRKHLSDLIEDEEDEVSSSLPDRPRTHRKASTSST
YSVTSMDALWEKHPRRLSEAGLRRSSDHSVVLTEDTDSFIIGERVWVGGTKPGQIAYIGE
TQFAPGDWAGIVLDDPIGKNDGSVAGVRYFQCAEKRGVFSRLTRLTRTPLVSHAAHDASP
TSDASSVFERPPSGAARYRRTLSPNGSVRSVVSSKMNASISTTTNGELRLGDRVIVSSSR
GSKAGTLKYVGVTEFAPGVWAGVELDDPLGKNDGSVDGKRYFECAPRFGLFAPIAKVSRS
PSNRKPGACAIHSNGRMTPMRRSNSRESLTSLGTSVASSRVGVRLGVTALGAQRIGGPRA
SSTPVSAKNALQELLREKQHHLERLMRERELERAEIAKVSVQADRAETALAQLQKEAAQA
TTENGKLKAELDRLTQQLEDEKQKVEDLLFKHEEENINKEDYNKYKDAMEAEKFARDQRI
RELEAEVALQAARADAAAATLRAGDQQRAAELSALADQHRDELAAAHTLSSELQKLLDEA
YALLKEKDSEKDSIGKSMSEELTKVKTEYEKALAEAKSKISVAQTEFDTQVSVFTAKLQL
AESKLESEKQNLERLNKENSQTVTDLNAKLAQLQASVDDKTHELNKVIGASKEHEVNLNK
EITKLKIELSAKVLDLEQLEDAKAKQEATFKILQEEITKIREEHVTKVNEYESLLSEVTL
QNEKSKSDIGELQQSLAAKTREYEKLLHDSSNSSSATELLINEYKQNIHERDKEIIKLKD
DYEQATANFNIKHSKIAEEHKKEIDNRNSKIEELIKEIETHKQVLDQNKIELDSLNSQFT
HNIDELKAVKEENERLKQQINEITQANNELKAKISAMELEIGELKRNLASNVDKCSDIQK
SKDKIEAEYMNLTGQATDSNEQFIQLSQHLKKTEKELEEFKDKAREAANNHGRIEQELKQ
KVFKLQEDFALERGQLIKSYDEQVEQLKIADSKIKELDNKTIELSKNLQEMASKTDQLLD
ENTNLKKEIENLITREQELNKEYETMCKKTEVDMEKYKAEIAVLKADGATSQVTLMEKVD
QLTEAQNELNNKLEEARKNEDSLQLVIDDMNLQLGNQKSQFEQELSHVHSQLNGVKEELI
SSRLEEAQLKQSLLDKENIIKELTRKSEILEVDINSNVEIVKEKDRQITEVNVELNGALE
SKKLLEEKLTASALEYSTLKQQYETLSSNSSAEESVLRDQLNQLESLRKEIAVVTQDKNL
IETKYDELSKQLVKLKSEHDEAVKKLDANVTTNTNLNKALEEHKDLLKTESEKGKENFGK
VKHLEDEIIRLGQEIQICASKENELNILNESLNNMVAELKNQNAELNNKYKIDTESLKNT
VKPLESRVVEQEKQLQELQQTKEKVIELQQIIAKSESDIKQLTSINDGQKINYEDLNKQI
QKEYDEYKKDAKRAKHDLKAQLEAYDKELKESKAKVKFEMEKQFALQQKLSDADNKVVEL
TNKLELVAVQQNASMERDDKLEKLTLELQATRKSTSESLAKSEITINALKNEVEQRKVEL
KQKQELIAKLQEDVKNLIAKAEIAEREKALALKEMASKGKDKNDNNAMGVQGAGDSAGQI
AEEKAEIEGQVSFLNSVIVDMQRKNQLLLARVQALEGGSPDEPTFNGRKTPRAVAPRLFC
DICDVFDAHDTEDCPRQSAEPDLPPATPGTRQKPPPRPYCDICEVFGHATENCDEEETF
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcgaaacgaaaatcagcttctctgacggcagctcgtcggacgccgtgcggaaa
ctcagcgacgacttatctcgaaaacatttgtcagatcttattgaggacgaggaagacgaa
gtgtcgagcagtctgccggacagaccgcggacgcatcggaaggcatctacgagcagtacg
tacagcgtcacatcgatggacgcgctgtgggagaagcacccgcgccgcctcagcgaagcc
ggcctccgcaggtcctcagaccacagtgtcgttctgacggaagatacagacagcttcata
atcggcgagcgcgtgtgggtgggcggcactaaacctggtcagatcgcgtacatcggagag
acgcaattcgcgcccggcgactgggccggcatagtgcttgatgatcctattggtaaaaat
gatggatcagtggcgggcgtccgttacttccaatgcgccgagaaacgcggcgtgttctcc
cggctgacgcgcctgacgcgcacgccgcttgtgtcgcatgcggcgcacgatgcgtctccc
acttctgacgctagtagcgtctttgagaggccaccgtccggtgccgctcggtaccgacgc
acgctgtcacccaacggcagtgtacgaagcgtcgtcagcagcaaaatgaacgcatcaatt
tcgacaacgaccaatggtgaacttcgcctcggcgatagagttatagtatcgagcagccgc
gggagcaaagctggtaccctaaaatatgtaggcgtcacggaattcgctcccggcgtttgg
gcaggagtcgaactagacgaccctcttgggaaaaacgatggttccgtcgacgggaagagg
tacttcgagtgcgcgccccgtttcggtctgttcgcgccgatagcgaaggtgtcgcggtcg
ccatcgaaccgcaagccaggcgcatgcgctatccacagcaacggtcgcatgacaccgatg
cgacgctcgaactcacgcgagtcgctcacgtcgctgggcacgtcagtggcgtcgtcacgc
gtgggggtgagactcggggtgacggcgctcggagcgcagcggatcggcggtccgcgagcg
tcgtccacccctgtctcggcgaaaaacgcgcttcaggagctgctacgcgagaagcagcat
cacttagagcggttgatgcgagaacgggagttggagcgggcagagattgcgaaagtctct
gtgcaggctgaccgagctgagactgcgttggcacaactacagaaggaagcagcacaggcg
acaacggagaatggcaaactaaaagctgaactggaccgattaacgcagcagttggaagac
gaaaagcagaaagtcgaagacctgctttttaagcatgaggaagagaacatcaacaaggag
gattacaataaatacaaagatgccatggaggcagagaagtttgcccgcgaccaacgcatc
cgcgaactggaggcggaagtggcgttacaggcggcgcgggcagacgcggccgccgccacg
ctgcgcgccggcgaccagcagcgcgccgccgagctgagcgcgctcgccgaccagcaccgt
gacgagctcgccgccgcacacacgctgtcttcggagcttcaaaaactcttggacgaagcg
tacgccctgcttaaagaaaaggacagcgaaaaggattccatcggaaagagcatgtcggag
gaattgacgaaagtaaagaccgagtatgagaaagctctggccgaagccaagtctaagatc
tcagtcgctcaaacagaattcgacacgcaagtatccgtttttaccgccaagttacaactg
gcggaatcgaaactggaatctgaaaagcagaacttagaaagactgaacaaagagaacagt
cagactgtcacagatttaaatgccaaactggcacagctccaagcgtctgttgacgacaag
acacatgaattaaataaagttattggggcgagcaaagaacacgaagttaaccttaacaaa
gaaataacaaagctcaaaatagaactcagcgccaaagtattagacctggaacaacttgaa
gacgcgaaagcaaagcaagaagctacatttaagatactgcaagaagaaatcactaaaata
agagaggagcatgtgacgaaagttaacgagtatgaaagtcttttgagcgaagtgacactg
caaaatgaaaaaagtaaatcggatataggagagttgcaacaaagtttggctgctaaaaca
agagaatacgaaaagttattgcatgattccagtaactcgtcaagtgccactgaactactt
attaacgaatataaacaaaacattcacgagagagacaaagaaattattaagttaaaggat
gattatgagcaagctacggccaatttcaacataaagcacagtaaaattgcagaagagcat
aagaaagaaatagataatcgaaactctaaaatagaggagttaataaaagaaatagaaact
cataagcaagttttggatcaaaataagattgaactggattctctgaactctcagtttaca
cacaatatagatgaattgaaggcagtaaaagaagaaaatgagagactaaaacaacaaatc
aacgaaataacccaagctaacaacgagctgaaagcaaaaatatcggcaatggaattagaa
atcggtgaacttaaacgtaaccttgccagtaatgttgataaatgcagtgatatacaaaaa
tctaaagacaagattgaagctgaatatatgaatcttactggacaggccactgactctaat
gaacagttcattcaactatcacagcatcttaaaaaaacagaaaaagaactagaagaattt
aaagacaaggcccgggaggcagcgaacaaccatggtaggatagaacaagaactgaaacaa
aaagtgtttaaattacaagaagattttgcgctcgaacgtggacaattaataaaatcatac
gatgaacaagtagaacaactcaaaatagcagacagcaaaattaaagaattagataacaaa
accattgaattgtctaaaaatcttcaagaaatggcgtctaagactgatcaactgctagat
gaaaataccaacttaaagaaagaaattgaaaacttaataaccagagaacaagagttaaac
aaggaatatgaaacgatgtgcaagaagactgaagtagatatggaaaagtataaagcagaa
atagccgttttgaaagcagatggtgctacatcacaagtaacattgatggaaaaagttgat
cagctgacagaagctcaaaatgaattaaataacaaacttgaagaagctagaaaaaatgaa
gattccttgcaattggtaatagatgacatgaatttacaactcggaaaccaaaaaagccaa
tttgaacaagaattaagccacgttcatagtcagttaaatggtgtgaaagaagaattaatt
tcctccagacttgaagaagctcaactcaaacaatctctgcttgataaagaaaacattatt
aaagaactaacccgtaaatcagaaattctagaagttgatattaattccaacgtcgaaatc
gttaaagaaaaagatcgtcaaattactgaagtaaatgtagaactaaatggtgctttagaa
agtaagaaactattagaagaaaagctaacagcgagtgctttagaatactcgacattaaag
caacaatatgaaactctttctagtaattcttccgctgaagaatcagttttaagggaccaa
ctaaatcagctggagtcgctgagaaaagaaattgcggtcgtgacgcaagataaaaactta
atagagaccaagtatgatgaattatcaaaacagttagtgaaattaaaatctgagcatgat
gaagctgtgaagaaattagatgcaaatgtcacaacaaatactaatctaaataaagcactg
gaagaacataaagatttgcttaaaaccgaaagtgagaaaggtaaagaaaatttcggcaag
gttaaacacttagaagatgaaataatccgtttgggtcaagaaattcagatatgcgcatca
aaggaaaatgaattgaatattttaaatgagagtttaaataatatggtagcagagctgaaa
aatcaaaatgcagaattaaataataaatataaaatagatacggaatctctaaaaaatacc
gttaagcctttggaaagtcgagttgtggaacaagaaaaacaattacaagaattacaacaa
accaaagaaaaagtgattgaacttcaacaaataattgccaaatcggaaagtgatattaaa
cagttgactagcattaatgacggccaaaagataaactacgaagacttgaataagcaaata
caaaaagaatatgatgagtacaagaaggatgccaaacgcgctaaacacgacctaaaagct
cagctagaagcctacgacaaagaattaaaagagtcaaaggctaaagttaaattcgaaatg
gaaaagcagttcgcattacaacaaaaattgagcgatgctgacaacaaagtagtagaatta
actaacaaattagaattagtagcagttcaacagaacgcaagcatggagagggacgataaa
ttagagaagttgacattagaattgcaagcgacgaggaaatctacttccgaatctttagcg
aagagtgaaataacaattaacgcgctgaaaaacgaagtggaacagcgaaaggtcgagttg
aagcagaaacaagaactaatagcgaaactgcaagaagacgtgaagaatcttatagccaaa
gctgaaattgctgaaagagagaaggctcttgcgctcaaagagatggcctcaaaggggaaa
gacaagaatgataacaacgcgatgggcgtacaaggggcgggcgacagcgccggacagatc
gcggaagagaaggcagaaattgaggggcaggtgtcgttcctaaactccgttatcgtggac
atgcagcggaagaatcagttgctgcttgcgagggtgcaggccctggaggggggatcgccc
gacgaacctaccttcaacgggcgcaagacgccgcgagcggtcgcgccgcgtctcttctgc
gacatttgcgacgtgttcgacgcgcacgacacagaggactgcccgcgccagtcggcggaa
cccgatctgccccccgcaacacccggcactaggcagaagccgccgccgagaccctactgc
gacatttgcgaagtattcggacacgcgacagagaactgtgatgaagaagaaacgttttaa
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integrated database retrieval system
