Choristoneura fumiferana (eastern spruce budworm): 141428016
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Entry
141428016 CDS
T11020
Symbol
pelo
Name
(RefSeq) pelota mRNA surveillance and ribosome rescue factor
KO
K06965
protein pelota
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
141428016 (pelo)
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Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_2
eRF1_3
Motif
Other DBs
NCBI-GeneID:
141428016
NCBI-ProteinID:
XP_073943796
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Position
5:7203028..7208385
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AA seq
388 aa
AA seq
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MKLNHKNIERDGCGSIGLTPEEPEDIWHAYNLISEGDVVTASTVRKVQTESSTGSSTSNR
VRTTLTIKVETIDFDTLACVLRLKGRNVVENQYVKMGAYHTLDLELNRKFTLQKVLWDSV
ALERVEMACDPAANADVAAVVMQEGLAHVCLITPSMTLVRVKIDITIPRKRKGFVQQHEK
GLNKFYEAVMQGIRRHIDFSIVKCVIIASPGFVKDQFFEYMMQQAIKTDDKILIDNKSKF
LLVKASSGFKHSLKEVLQEPAVMAKISDTKAASEVKLLESFYTMLQLEPAKAFYGKKHVE
KANEAQAIEILMISDKLFRCQDIQKRKEYVALVDSVRDNGGDVRIFSSMHVSGEQLDQLT
GVAAILRFPMPELEDSDEEGDDANSDSD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaatcacaaaaacattgaaagagatggctgcgggagtattggtctcacgccg
gaagagccagaagatatatggcatgcatacaatctcatatccgaaggggatgttgtgacc
gcttccactgtacgcaaagtacagacagaatcctcaacgggttcgtctacaagcaaccga
gtgaggaccacgctgaccatcaaagtggagactatagacttcgacacactggcgtgtgtt
ttgcgccttaaagggcgaaatgttgtggagaaccagtatgttaagatgggtgcatatcat
acattagatctagaattaaatagaaagttcactttgcaaaaagtgttatgggattccgtg
gcactggaaagggtggagatggcctgtgaccccgctgctaatgctgatgtggccgcggtg
gtgatgcaagagggccttgctcatgtctgtctcatcacaccatccatgacacttgttaga
gttaaaatagacatcacaataccaagaaaaagaaaaggttttgtgcagcaacatgaaaag
ggtttaaataaattctatgaagcagtaatgcaaggcatacggagacatatagacttctcc
attgtaaaatgtgtgattattgcatcaccagggtttgtgaaggatcaattctttgagtac
atgatgcagcaagccatcaaaaccgatgacaaaattcttattgacaataagagcaagttc
ttactagtaaaagcttcctctggatttaagcattctttaaaagaggtattacaagagcca
gcggtgatggcaaagatctctgatacaaaagcggccagcgaagtaaagctgctagaaagt
ttctacacaatgctgcagctggaacccgccaaggctttctacggaaaaaagcatgtagag
aaagcaaacgaagcacaggctatcgaaatattaatgatatctgacaaattgtttaggtgt
caagatatacaaaagaggaaggagtatgttgcgctagtggactccgtgcgggacaatggg
ggcgatgtcagaatattttccagcatgcatgtatctggtgaacagctggatcagctaaca
ggcgtggcagctattctacgctttccaatgcccgaactagaagacagcgatgaagaaggt
gacgacgccaattccgactcagattaa
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