Choristoneura fumiferana (eastern spruce budworm): 141428122
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Entry
141428122 CDS
T11020
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141428122
Membrane trafficking [BR:
cfum04131
]
Protein recycling
Others
Retriever complex
141428122
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PolC_DP2_central
Motif
Other DBs
NCBI-GeneID:
141428122
NCBI-ProteinID:
XP_073943986
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All DBs
Position
5:11610032..11624592
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AA seq
938 aa
AA seq
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MSSNYKWSSKKKQKHLKHEYPKFDVTNHPLKLNIVTTKPSPSTSFIENLNKWTSPFEEID
PLLRFEQMELNEDPTPAEPIADDSTNYSKAWISRRAVILNKYTTGEKLTIISSFLPGGEK
VSSFSALIRQVSNLNEKVKHRLEQLDDFDEDSVRKTMGLSQQEFVNKINVLNDEIKKAWA
SEQRVKAFKIAIQCSKLLSDVNVMQFYPSKFVLITDILDKFGNLVFARLKDRSYGPNVVK
SHQDIDPSEVPEAAKETCQNWLFKMASIRELLPRLYMEMSLLKCYTFISKENIKPAIARI
TLMIRGIGNPLVATYLRLYLCKVAANLLGNECEEFFHSNLKEFLEEYQQIFHPALRKKFE
VQLLTLDKYLSLYIPAVDWLMYGTVNSTKCKLTLLEGLLQQCEEMENNELLLYCLISAFD
SSSVNIKATKILEMVQNSTEKMVLLSEVLIALGEHLCNTESYQQVASESLIQTWWKIANS
MKSTVNFLQVLAPWMQFACIHLSTQHVNIILRGTIRYMIKCGKPADEFSGNFQFVLRRML
NSIPDVEELFLMDAFMPLVELVQTSNARTMMAKTVLSIFFTKYKLVKIEDHIVIGSLMRL
CCILHDSINAVTVEDEVKLCADLITKYIHAVDYHDDLEQQLNFYVESRAAFIKLDAVLVA
LVHSVNALAARGARASRGWLQRACAAYCFVTAPSLHCPLAKAQLYLLSGQVALLNNCIGQ
AEANFKALISLIPDIPEFVIEDGQKKMTHIKVSSLISDFLSTLLIMPDNMDSNVKAYILS
GFIKTIERIHWRKTDPLYYMSLLHTLDLLCEMTHENYAYSIDGVISNDKLYGSDEEYIES
IENYSSNITQEILVVLKALADSKETRKQYELALELFWRVIRRGDLEDNSMANLAANLWML
SRKLQDSNQRVSISMLLALKNDKTKVSQQLLQKLQDNA
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaattacaagtggtcttcaaagaaaaaacaaaagcacttaaaacatgaatat
ccaaaatttgatgtaactaatcatcctctgaaactaaacattgtgacaacaaaacctagt
cccagtacaagttttatagaaaacttgaataaatggacttcaccatttgaagagattgat
ccactgctaaggtttgagcaaatggaactaaacgaggatcccactcctgccgagccgata
gctgatgacagtacaaattattcaaaggcttggatttcaaggagggcagtaattcttaac
aaatacaccactggagaaaaactgactataatcagcagttttcttcctggtggcgaaaaa
gttagttctttttcagctcttattcgtcaggtttctaacctgaatgagaaagtaaaacac
cggctagaacagctggatgactttgatgaagactctgttcgaaaaactatgggtttatcc
caacaagaatttgtcaataagattaatgtgcttaatgacgaaattaaaaaggcttgggca
tcagagcaacgggtcaaagcatttaagattgccattcagtgttctaaattactatctgat
gttaatgtcatgcaattttatcccagtaaatttgtgttaatcacagatattttggacaaa
tttggaaatttagtgtttgctagactcaaggatagaagctatggtccaaatgttgtaaaa
tcgcatcaagatattgatccaagtgaagttcctgaggcagctaaagagacatgccaaaat
tggttattcaaaatggcttctataagagagttgctgccccgactgtacatggagatgtca
cttctaaagtgctacactttcatttcaaaagagaatataaaacctgctatagcaagaatt
accttgatgattagaggcattggtaatcctttagtagccacttacttgagactgtacctc
tgtaaggttgcagcaaatttattaggaaatgaatgtgaagaatttttccatagcaattta
aaggaattcctagaggaataccaacagatttttcatccagcgttaagaaaaaaatttgaa
gtgcagttgttaactcttgacaaatacttgagtctctacatcccagcagtagattggttg
atgtatggaacagtcaattcaactaaatgcaagctgactctgctggaggggttacttcaa
cagtgtgaggaaatggaaaataatgaattgttgctttattgtctaatatcagcgttcgat
tcgagcagtgttaacataaaggctacgaaaatattagaaatggtacaaaattccaccgaa
aaaatggttctgttgagcgaagtattgatagcgcttggagagcacctatgcaataccgaa
agctaccaacaggtggcgtccgaatcgctaattcaaacttggtggaaaatcgccaatagc
atgaagtccacagttaatttcttgcaagtactagcaccctggatgcagtttgcttgtatt
catttatcgacacaacacgttaatataatcctgcgggggactattcgatacatgatcaaa
tgcggcaagccggctgacgagttttctggaaatttccaatttgttttacgaaggatgcta
aactccattccagacgttgaagaactatttttaatggatgcttttatgcctttagtcgag
ttagtgcagacgtcgaacgctcgcacgatgatggccaaaaccgtattgtccatattcttt
acgaaatacaaattggtcaaaatcgaagaccacattgttattggtagcttgatgcgtttg
tgctgcatcttgcatgattctatcaatgcagtaacggtggaggatgaagtgaaactgtgc
gcggatctgatcaccaagtacatccacgctgtggattatcacgacgatctggagcagcag
ctcaacttctacgtcgagagtcgcgcggcgttcatcaagcttgacgccgtactggtggct
cttgtacattcggtgaacgcgctggcggcgcgcggcgcgcgcgcgtcccgcggctggctg
cagcgcgcgtgcgcggcgtactgcttcgtgacggcgccgtcgctgcactgcccgctcgcc
aaggcgcagctctacctgctctccggacaggtggcgctgctcaacaactgtatcggacaa
gccgaagcaaattttaaagctctcatcagcttgataccggatattccagagttcgtcata
gaagatggacaaaagaaaatgacccatattaaagttagcagcttgattagcgactttctg
tctactctgttaataatgccggataacatggacagtaatgtaaaagcttacattctgagt
ggattcattaaaaccatcgagagaattcattggaggaaaacagacccactgtattacatg
tcgctgctacatacattagatctcctctgcgaaatgacacacgaaaactacgcctatagc
attgatggagtgatatcaaatgacaaattgtacggttccgacgaagaatatatagagagc
atcgaaaattactcttccaatatcactcaagagattctagtggttctaaaagccctcgct
gactccaaagagaccagaaaacagtatgaacttgcgctggaactattctggcgcgtcatc
agacgaggggacttagaggacaactcgatggccaacctggctgctaacctgtggatgctg
tctcgcaaactgcaggattccaatcaaagagtctccataagtatgttgctggcgttaaaa
aatgacaaaactaaagtcagtcagcagttgctccaaaaactgcaggataatgcgtaa
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