Choristoneura fumiferana (eastern spruce budworm): 141428144
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Entry
141428144 CDS
T11020
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141428144
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cfum01002
]
141428144
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfum04121
]
141428144
03036 Chromosome and associated proteins [BR:
cfum03036
]
141428144
03400 DNA repair and recombination proteins [BR:
cfum03400
]
141428144
Peptidases and inhibitors [BR:
cfum01002
]
Metallo peptidases
Family M67
141428144
Ubiquitin system [BR:
cfum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
141428144
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
141428144
BRISC complex
141428144
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
141428144
DNA repair and recombination proteins [BR:
cfum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
141428144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
BRCC36_C
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
141428144
NCBI-ProteinID:
XP_073944018
LinkDB
All DBs
Position
5:12058673..12061847
Genome browser
AA seq
264 aa
AA seq
DB search
MLNKVLLSTDVTLVCVQHALSTEKEEIMGLLIGEVHDNGTLVSIVSSVILRRLDKKPDRV
EISEEQLVQATLRAEELAAEVGRPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFV
GIIFAAFLTDQSTKAPSIQITCFQSVTDGSTQSRREIEMEVVNNNDSLMMNNFEILTQLP
AILKEEEDEAYNNEVGQGETDDIIIKQHNAAVRTIAIGHIVEKMSRPMLEALVARNALNV
VRLRALKKQHQELMARLENMSCNV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgctgaataaagtcttgctatctaccgacgttactctagtttgcgttcaacatgctttg
tccacggaaaaggaagaaataatgggattattgattggagaggtccacgacaatggtact
ctagtttcaatagtatcatcagttattttacgtcggttagataagaagcccgatcgggta
gagatttcagaggagcaattggtccaggctacgttaagagcagaagagctggcagccgaa
gtgggtcggccgctgagggtagtagggtggtaccattctcacccgcatattaccgtctgg
ccttcacacgtagaccttgcaacacaatcaatgtaccagaggatggatgccagttttgtt
ggaataatatttgctgccttcctgactgaccaaagcactaaagctccatcgatacaaata
acttgtttccaatcagtcacagatggttcaacccaaagtcgaagggaaattgaaatggaa
gttgtgaacaataatgactctcttatgatgaacaactttgagatcttaactcaactgccg
gcaattctcaaagaagaagaagatgaagcatataacaatgaagtaggtcaaggtgaaaca
gatgatattataatcaagcaacataatgcagctgtgaggactattgctataggacatata
gtagaaaagatgtcacgaccaatgttagaggccttagttgccagaaatgctctcaatgta
gtgagattaagagcattaaaaaaacagcaccaggaactgatggctcgtttggaaaatatg
tcatgtaatgtataa
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