Choristoneura fumiferana (eastern spruce budworm): 141428163
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Entry
141428163 CDS
T11020
Symbol
Nup154
Name
(RefSeq) nuclear pore complex protein Nup154
KO
K14312
nuclear pore complex protein Nup155
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141428163 (Nup154)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfum03019
]
141428163 (Nup154)
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141428163 (Nup154)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Utp8_b_propeller
Motif
Other DBs
NCBI-GeneID:
141428163
NCBI-ProteinID:
XP_073944058
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All DBs
Position
5:complement(12492448..12509511)
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AA seq
1351 aa
AA seq
DB search
MPSVVGIADAPNPASNIKMQLECLELAGCTLDRHINADNSRPSFLEITGIAAQRVPTCSG
LNAGDYRNLAALLNHPSLSQLKTLNKVPLPPEIMEHFAHMQCHCLMGVFPEISRVWLTID
SNIYVWAFEHGSDVAYFDGLGETIVSVGLVKPKPGVFQSFVKYLLVLTTTVEIVVLGVTF
SSSKSEGTAFEEMHLVPEPVFVLPTDGVSMMSVKSTSSGRIFMGGKDGCLYEITYQAQLG
WFGKHCSKINHSTSALSFLVPSFLNAALYDEDPIVKIEVDNSRNILYTLSEKGCIEVFDL
GQNGDSLSRVVRLTQGKIVSSATDIVKTLEATNFKPVIAISAVDSSESEHFNLVAVTQAG
ARLYFSTESGDASQGRPIRPQYLALLHVRLPPGFTPNASVLKPKQVHSAVYENGTLLMVC
SAGGGEAETLWCLSRAIPGAGFSEAHTLMTLDGPAWALTPLPSQHTAQLSPALLTKKDAW
SVSRWAVVTGAGAALVAAGAAPDLLRTLLRDCRGPDAQAVKDFFQLHGVDQACACALYLA
CEENTSDLSISEWATRAFFLYGGQTTPAPMYQQNSQIASTIASPKFSPRQMSTPMTARGQ
QHMQPANLNQSYQQHQMNQSYQRSPNQPMMPQYQQNAMSPSFNQSFGANVTQQQRDSNYP
MQVEFSAKHNGIYIYVGKILAPIWNQKCVSKSLTPDNKEFMSSRVSGEDCAFTVQRLQRV
DMFLQRAVPTQPSDENSSLHALKLFVSMAIEMLSLWKVLCEHQFHVIAASLPPEQQSALQ
AASFRELLVGGQEVACLLLGSLVAGYLRDNASVDGISHKLRQLCPSLYRQEDATCSKANE
LLIFAKQQKNPAEREEMLQHALKLCKDVAPNVNLPLVCSKLVSAGFYSGVVDLCVACGSK
LDPQDKAVHFYKSDQPSQDREGQLIYYRRMEIYREVCNALERLYERSSESYANETGVLNT
SRGQAANDNTLSLSAADANYQGRKLVWDCLSRDDELLHVAVYEWLVSKNLGSELLSLGTA
PPDSLRTYLHAAARSASPPAALHLLDLLWKVLEKSGDHLAAANVLEGLATRPGSGATLSQ
RMAWLSAGVVCVRGAGAGGGELLRRLEEAGEVARVQAAVRAAAAALPRALRPPPPLLQRL
HDQLLDITQLYEEYADRYNLWECKLAIVQCSGHNDDLLVENIWSNILAEAEAAARALPSP
DDRLASVLSKLVSLGREYVNTGHCFPLYFITRQLEILACKLQTDQGMVFRTILNIGVSME
QVLDIYIKLVSVNERVWLGCGDETHVCGAAARLLEAARGELAPLPAPLRRRALARCKDLH
EAAISSLQARPNTQRLIDRLSVAQAHLDRMD
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtgttgtgggcatagctgacgcgcctaatcccgctagcaatattaagatgcaa
ctggagtgtttagaactagccgggtgtaccctggaccggcacataaacgctgataattcg
cgcccttcgtttttagagattactggaatagcagctcaaagggtaccaacatgcagtggt
ctaaacgccggggactacagaaacctagcagcactgctcaatcatcccagtttgtcgcaa
ctgaagaccttgaacaaggtcccacttcccccagaaattatggaacattttgcgcatatg
caatgtcattgcttgatgggagtgtttccagaaataagtagagtgtggcttacaatagac
agcaacatatatgtgtgggccttcgagcatggcagtgatgtagcctactttgatgggctg
ggtgaaaccatagtcagtgttggactggtgaaaccaaagcctggagtattccagagcttt
gtcaagtacctgttggtacttaccacaactgttgaaattgtagttttaggtgtaaccttt
tcttcaagcaaaagtgaagggacagcatttgaggagatgcatctggttccggagccagta
tttgtccttcccacagatggcgtctcaatgatgtctgtaaaatcaacttcaagtggacga
attttcatgggcggaaaagatggctgcctctatgaaataacttaccaggctcaattggga
tggtttggtaaacattgtagtaaaataaaccattcaacaagtgccttatcattcctggtg
ccatcatttctaaatgcggctttgtatgatgaagaccccatagtcaagatagaggtagac
aattcccgaaatatcctatacacgctgagtgagaaagggtgcatagaggtgtttgactta
ggtcagaatggtgatagtctcagcagggttgtgaggttaactcagggaaaaattgtgtct
tctgctacagatatagtaaaaactttagaagcaacaaatttcaaacccgtcatagcaata
tcagctgtggatagttccgaatcagaacatttcaatctcgtagcagtcactcaagctgga
gcgagattgtatttcagtacagaaagtggagacgcgagtcagggcaggcccattcggccg
cagtacctcgcccttttgcatgttcggctgccgcccgggtttaccccaaacgcatcagtg
ctcaagcccaaacaagtgcatagtgcagtttatgaaaatggcacgttactgatggtgtgt
tcggcgggcggcggcgaggcggagacgctctggtgcctgtcgcgagccatcccgggcgcg
gggttcagcgaggcgcacacgctgatgacgctcgacgggcccgcgtgggcactcacgccg
ctgccgagccagcacaccgcacagttgtcacccgctttgcttaccaagaaagatgcttgg
agtgtgtcgcggtgggctgttgtgacgggtgccggcgcagccctagtggccgcgggcgca
gccccggacctactccgaacgctccttcgcgactgtcggggacctgacgcgcaagctgtc
aaggatttcttccaacttcacggcgtagatcaagcgtgcgcttgcgcactgtacctggcc
tgcgaggaaaacactagcgacctctcaataagcgagtgggcgactcgcgcgttcttcctt
tacggcgggcaaaccacgcccgcgccgatgtatcagcagaattcgcaaattgcatcgact
atagcgtctccaaagttctcacctcgccaaatgtcgacgcccatgaccgcaagaggccag
caacacatgcaaccagccaacttgaaccagtcttaccaacaacaccaaatgaaccaatcc
taccagagatcacccaaccaacccatgatgccccagtaccaacagaatgccatgagccct
tcatttaatcaaagtttcggggcgaacgtgactcagcaacagagagattctaactacccg
atgcaggtagaattcagcgcgaaacacaacggaatttatatctacgttggcaaaatttta
gcgcccatctggaatcagaagtgcgtttcgaaatcgctgacccccgataataaggaattt
atgtcgagccgagtgtctggtgaggactgcgcatttacagtacagcggcttcagcgtgtg
gatatgttcctgcaacgagccgtgcccacgcaaccttccgatgaaaactcctcgctgcac
gctctcaaacttttcgtctcgatggcgatagaaatgcttagtctctggaaagtcctctgc
gagcaccagttccacgtgattgccgctagtcttccgccagaacaacagagtgcgctgcaa
gcagccagtttcagggaacttttagtgggcggacaagaagtggcctgtttgctgctcggg
tcgttagtggctggctaccttagggataacgcgtccgtcgacggcatctcacataaactt
aggcaactgtgcccttctctatacaggcaagaagatgccacgtgttccaaggcaaatgag
ttattgatatttgcaaagcaacaaaaaaatcctgccgagagagaagaaatgctccaacac
gctttgaaactttgtaaggatgtagctccgaatgtaaatttgccgctggtgtgttcaaaa
cttgtatcagcaggattctattctggtgtcgtggatctatgtgtcgcgtgcgggagcaag
ttagacccgcaggataaagcggtgcacttttataagagcgaccagccttctcaagacagg
gagggacaacttatttattatagaaggatggagatttatcgcgaagtatgcaatgcgtta
gaaagactgtacgagaggagctctgaatcatatgccaatgaaacgggagtactgaatacg
tcgcgtgggcaggcggctaacgataatacacttagtttatcagctgccgacgctaactat
cagggtaggaaattagtttgggattgtctgtcgcgagatgacgagttgctacacgtagct
gtctacgagtggctagtcagtaaaaacttaggttcagaattgctttcactgggcacagcc
ccaccggactccctgcgcacttacttgcacgcggcggcgcgatcagcgtcaccgcctgcg
gccttacacttgttggatcttctgtggaaggtgctcgaaaagagcggagaccacctcgct
gccgcaaacgtgctcgaaggcctggccactagacctggttcgggcgcgacgctgtcgcag
cgcatggcgtggctgtccgcgggcgtggtgtgcgtgcgcggcgcgggcgcgggcggcggc
gagctgctgcgccggctggaggaggccggcgaggtggcgcgcgtgcaggccgccgtgcgc
gccgccgccgccgcgctgccccgcgcgctgcgcccgccgccgccgctgctgcagcggctg
cacgaccagctgctggacatcacgcagctgtacgaagagtacgcggatcgctacaacctg
tgggagtgcaaactcgccatcgtgcagtgttccggtcacaacgacgacttgctggtcgag
aacatctggagtaatatcctggcggaggcggaggcggcggcgcgcgccctgccgtcgccc
gatgaccgcctagcctctgtactgagcaagctcgtctcactgggccgcgagtatgtcaat
actggacattgtttcccactgtatttcattacgcggcaactggaaatattggcatgcaaa
cttcaaacagaccagggcatggtctttaggacaattttaaacattggagtatcaatggag
caagtgctagatatttatattaaactagtatctgtgaacgagcgcgtgtggctggggtgc
ggggacgagacgcacgtgtgcggcgcggcggcgcggctgctggaggcggcgcgcggcgag
ctggcgccgctgcccgcgccgctgcgccgccgcgccctcgcgcgctgcaaggacctgcac
gaggccgccatatcctcgctacaggcgcggccgaatacgcaacgcctcatcgatagactt
tcagttgcgcaggcgcacttggatcgaatggattga
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