Choristoneura fumiferana (eastern spruce budworm): 141428232
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Entry
141428232 CDS
T11020
Symbol
PolD1
Name
(RefSeq) DNA polymerase delta 1, catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03030
DNA replication
cfum03410
Base excision repair
cfum03420
Nucleotide excision repair
cfum03430
Mismatch repair
cfum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141428232 (PolD1)
03410 Base excision repair
141428232 (PolD1)
03420 Nucleotide excision repair
141428232 (PolD1)
03430 Mismatch repair
141428232 (PolD1)
03440 Homologous recombination
141428232 (PolD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfum03032
]
141428232 (PolD1)
03400 DNA repair and recombination proteins [BR:
cfum03400
]
141428232 (PolD1)
Enzymes [BR:
cfum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
141428232 (PolD1)
DNA replication proteins [BR:
cfum03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
141428232 (PolD1)
DNA repair and recombination proteins [BR:
cfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
141428232 (PolD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
141428232 (PolD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
DUF7931
Motif
Other DBs
NCBI-GeneID:
141428232
NCBI-ProteinID:
XP_073944188
LinkDB
All DBs
Position
5
Genome browser
AA seq
1085 aa
AA seq
DB search
MDKKKQFSKPPIKRFKSNDDDDDNEPPCSFEEQLAGMDSHDFESQQVIGEGPDNQSTNIK
WSRPPPPAMNPKMDKLVFQQLDIDHYNGQPISGMPGSQLGPVPIMRMYGITMEGNSVCCH
LHGFTPYFYVTVPLNFTESSCHSMKTNLSKALLEDLRSNKDNIKEPVLEIRLIKARSIMH
YKGDNDITFARVSVALPKLIAAAKRLLDRQPPSFGLMDPAFYETNIDFDIRFMVDTSVVG
CSWIELPATKWSLRGQKTTLKPESRCQIEVDVAWNAFIAHQPEGEWSKVAPFRILSFDIE
CAGRKGVFPEPNHDPVIQIASMVIRQGELEPYLRNVFTLNTCAPIVGSQVLSYQSEAEML
AKWSDFFRELDPDIITGYNISNFDWPYLINRAKHLKVENFDFLGRIKNVRSVIKDSILQS
KQMGRRENKSINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIISDLQ
NESEQTRRRLAMYCLKDAYLPLKLLNKLMCIINHMEMARVTGVPLLCLLTRGQQIKVVSQ
LLRKAKDAGYLMPAYHSQGSDDQFEGATVIEPKKGYYADPISTLDFASLYPSIMMAHNLC
YTTLLPPTAQRELNLNTDDITTTPSKNMFVKANVRKGLLPEILESLLAARKKAKADLKNE
TDPFKRSVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEFTKSEVEK
KYTKANGYPEDAVVIYGDTDSVMVKFGVKTLEESMKLGSEAAEFVTAQFVKPIKLEFEKV
YYPYLLINKKRYAGLYFTRPDKYDKMDCKGIETVRRDNCPLVSNMMSTCLQKLLIDRDPD
GAVNYAKQIIADLLCNRIDISQLVITKELTKNDYAAKQAHVELANKMKKRDPGTAPKLGD
RVPYVLCCAAKNTPAYMKAEDPIYVLENSVPIDANYYMENQLSKPLLRIFEPILGEKAES
LLLKGEHTRTKAMVTSKVGALAAFTKKREKCIGCKAVMPNDSKSALCNHCADKEGQLYIS
EIFKLRQLQEKFSKLWTECQRCQGSLHEEVLCTNRDCTIFYMRKKVGMELDAQEKNVLRF
GLPSW
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaagcagtttagtaagccgccaataaaaagatttaaatctaatgacgac
gatgacgataacgaacctccttgcagcttcgaagagcaactggcaggtatggacagccat
gactttgagtcccaacaagtcataggtgaagggccagataaccaatcaaccaatattaaa
tggtcccgacctcctccgccagctatgaatccaaaaatggataagttagtgtttcaacaa
cttgatatagatcattataatggacagccaatctctggcatgccaggatctcaattaggt
cccgttcctatcatgagaatgtatggcatcactatggaaggcaactctgtgtgttgccat
ctgcatgggtttacaccatacttttatgtaactgtgccattaaactttactgaatcatca
tgtcacagtatgaaaaccaatcttagcaaagctctcttagaagatttacgctcaaacaaa
gataatattaaagagcctgtattagaaattcgcctcataaaagcccgttcaatcatgcat
tacaaaggagacaatgatataacatttgccagagtttctgtagccttaccaaagctcatt
gctgcagcaaaacgcttactagatagacagccaccatcatttggattgatggatcctgcc
ttttatgaaactaacattgattttgacattcgcttcatggtggatacttctgtggtgggc
tgcagttggattgaactaccagctacaaaatggtccctgagaggacagaagaccacactt
aaacctgaatccagatgtcaaattgaagtagatgtggcctggaatgcctttattgctcac
caacctgaaggagagtggtccaaagtagctccatttagaatattaagctttgatattgag
tgtgcaggcagaaagggagtttttccagagcccaatcatgatccggtgatacagattgca
tctatggtcattcgtcaaggtgaactagaaccatatctgagaaatgtttttacactaaat
acatgtgcccccattgtcggatcccaagttctcagttatcaatctgaggctgaaatgctt
gcaaaatggtctgacttcttcagggagttagacccagacattattactggatacaatatc
agcaattttgattggccatacctaataaatcgggctaaacatttaaaagttgagaacttc
gacttcttaggcaggatcaaaaatgtcagatcagtgattaaagattcgatcttgcaatcc
aagcaaatgggacgtagagaaaataaaagcattaattttgaaggaagggtgccatttgat
ctactgcttgtgcttgtaagagattataaattaaggtcatacactttaaatgcagtaagt
taccatttcctacaagaacaaaaagaagatgttcatcacagcattatcagtgatctacaa
aatgaaagtgaacaaacaaggaggagattggcaatgtattgcctaaaagatgcatattta
ccactgaagcttctcaacaaattgatgtgcattataaatcatatggagatggctagagtg
acaggtgttcctttattatgtttgctcacaagaggtcagcaaataaaagtagtcagtcag
ctattacgcaaagccaaagatgctggatatcttatgcctgcttaccatagtcaaggctct
gatgatcaatttgaaggagcaaccgtaattgaaccaaaaaagggatattatgctgatcct
atttctactttggattttgcatctctatatcctagtataatgatggcccacaacttatgt
tacactacattgttacccccaactgcacaaagagaactaaacttgaacactgatgatatt
acaactacaccctccaaaaatatgtttgttaaggcaaatgtcagaaaggggttgttgcca
gagattttagaatctctattagcagccagaaagaaagcaaaggcagatttgaagaatgaa
acagacccttttaagaggtctgtactggatggaagacaattagctctgaagataagtgct
aattctgtatatggttttacaggtgcacaagttggtaagctaccttgcctcgagatctcg
ggaagtgtaacagcatatggacggactatgattgaatttaccaagtcagaagtagagaaa
aagtacacaaaagccaatggttacccagaagatgctgtagttatttatggagacactgat
tcagtcatggtgaagtttggtgtcaaaacacttgaagaaagcatgaaattgggcagtgag
gcagctgaatttgtcacagcacagtttgttaaacccatcaagcttgaatttgaaaaagtt
tattatccatacttgcttataaacaaaaagcgatatgcaggtctttatttcacaagacca
gataagtatgacaagatggactgtaaaggtattgaaactgtcagaagggataattgccca
cttgtatcaaatatgatgagcacatgtctccaaaagttacttattgatagggacccagat
ggggcagttaactatgccaaacaaattatcgccgatctactatgtaatcgcatagatatc
tcccaacttgtgattactaaggagttaacaaagaatgattatgcagctaaacaggctcat
gtggaattagccaacaagatgaaaaagcgtgaccctggcactgctccaaagcttggtgat
agagtgccctatgtgctttgttgtgcagcaaaaaacacacctgcttatatgaaagctgaa
gatcctatttatgttttagagaacagtgttcctatcgatgccaactactacatggaaaat
cagttatcaaagcctttattaaggatttttgagccaattttaggagaaaaagcagaatca
ttgcttcttaagggagagcacaccagaactaaagctatggtgacctccaaagtaggcgct
ttagctgcattcacgaagaaaagagagaaatgcatagggtgtaaagctgtcatgcccaat
gattctaaatctgcactgtgtaatcattgcgcagacaaagaaggacagctttatatatct
gaaatatttaaattaaggcaactacaagaaaagttctcaaaactttggactgaatgtcaa
agatgtcaaggaagtctacatgaagaggtgctttgtactaatagagactgtactattttc
tatatgagaaagaaagttggaatggagttggatgctcaagaaaaaaatgttttgagattt
ggtttgcctagttggtga
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integrated database retrieval system
