Choristoneura fumiferana (eastern spruce budworm): 141428254
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Entry
141428254 CDS
T11020
Name
(RefSeq) sorting nexin-13-like isoform X1
KO
K17925
sorting nexin-13
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cfum04990
]
141428254
Domain-containing proteins not elsewhere classified [BR:
cfum04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
141428254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Motif
Other DBs
NCBI-GeneID:
141428254
NCBI-ProteinID:
XP_073944235
LinkDB
All DBs
Position
5:complement(15317299..15343235)
Genome browser
AA seq
1039 aa
AA seq
DB search
MALKMAKWFGLISVIVIGLFGIGFYLTLLTFLVSFIVGILTILYLNYDDKKIFNVDLNCL
DDPLQQTNYSVQSPKILELFQSNKPLPKFDSRITGSETVDSFLNEIVTIIINDYVTPWYG
ILTNDEEFTSHSIKHLVVAASANVANRVKSVDWIHLLSTRFPEELTMHLKLFKQTRVRLK
HIDLVTSKDVANGNGKPSPKRQEERKTHRRNKSDTDLSWPPDSQTVGKSKFYDSSEDLSG
KTLIELFFDLESSIENRQICRDTFCIEPEKEYALLCEVAEAVIYLVAPEEAWECHALKLI
LIDLLSSVVLKPMIALLSDPDNINRAIIRICCRDSCLPSEQFLLVIRSCGDAEELDATLE
LVQKDIQKLHSRDSAGEWELQDRQKLSSLQYLARIIQARRATLGPQGTPCIATVEKVSEE
VTRSLKFLRATAAWKSNAQYLLEIELNEAVPIFRRMTKRDSARTSKAVIDNLRSSALELC
DTYLTPNRPGVMGIPENCHADLVRKITTEGEEFTNNPVICFDEVQKCVCDALEDDSSWQS
DFMMEGEQDPTINSEPKRDDKDTKKYGEKCKKIMKSCLNTLPKFFHKNRCKYEYPAKAST
FPRSIVRRVPVNRSHTLPKCKLGIETLPVPGARHNRSRSDIVGNFAQKMINESSGPSNLS
SANTSNLSLSHSEISQNAKKLMSPLQASIIETALVQEKGKAFGIYAIAVTRICDNEIWHI
YRRYSDFYDLHSSIKDKWPELGHLPFPAKKTFQNTSRSVLESRKRMLNNYLMNLAQLARD
ARYMALLSQDYLGGFLSPEIQAEKQSSSIDALFVNSLRAGMRTLKNMPDQFANTVDGVMD
GISKVFQGKGGENYTDIKPGNSSDAQDDGDESVALRLLEEVLGIRGLWLRRRLLAPLRTL
IADRVNRKLLELVSSLTSPRNVVQYLKTFKQWLTSRNNPASEYSRDAATRARTRVAAKVA
LLTASTDELRHIVGSDAARRGLLTVFDLFQTQEINKRLTLVLLEATLANLFPDNKFPELF
KKLYTNSPRVPAPKKNVNV
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggctttaaaaatggctaaatggtttggactaatttctgtaatagtgatcggattattt
ggtatcgggttctatttaacacttctcacgtttttggtatcgtttattgtggggattctg
acaattctctacttaaattatgatgataagaagattttcaatgttgatttaaattgtctt
gatgaccctttgcaacaaacaaattattctgtgcagtccccaaagattctagagttgttt
caatcgaataagccattaccaaaatttgatagtcgcatcacaggcagtgaaacagttgat
tcgttcctgaatgaaatcgtgacaatcatcatcaacgactatgtgacaccatggtatggg
atattgactaatgatgaggagttcaccagccattctattaagcatttggttgttgctgct
agtgctaatgttgctaacagagtaaaaagcgttgactggatccatcttctctcaacacga
ttccccgaagaactgacaatgcatctgaagctgttcaagcagactcgagtcagacttaag
catattgatctagtgacctctaaagatgtggccaatggcaacgggaaaccaagtccgaag
agacaggaggagcgaaagacacatagaaggaataagagtgacaccgatttatcgtggcca
cctgacagccaaacagttggtaaatccaagttctatgacagctctgaggatctaagtgga
aaaacattgatcgagctattcttcgatttggaaagttcaatagagaacagacagatctgt
cgcgacactttttgtatcgagccggaaaaggaatatgctttactgtgcgaagtggcagaa
gcggtgatatacttggtggcaccagaagaggcgtgggagtgtcacgcacttaaactgata
ctgatcgatttgctttcttccgtggtactgaaacccatgattgctttactcagtgatcct
gacaatatcaacagagctatcataagaatctgttgtcgtgattcctgtttgccatccgag
cagtttctattagtaatacggagctgtggtgatgccgaggagttggacgcaaccttagag
ctcgtccaaaaggatatacagaaattacactctcgagacagtgcaggggaatgggaatta
caagatcgacagaagttgtcatcgttgcagtatttggcaaggataatacaagccaggaga
gccacattaggtccacaaggaacgccgtgtattgcgaccgtggagaaagtatctgaggag
gtgactcgatcccttaaatttttaagggctactgcggcttggaaatctaacgctcagtac
ttgcttgaaatagagctcaatgaagcagtgcctatctttcgaaggatgacaaaaagagat
tctgcgcgcacgtcaaaagcagtgatcgacaaccttcgttcctctgccttagagttatgc
gatacatacctaacgcctaacaggccaggcgtaatgggtataccagagaattgtcacgca
gatcttgtcaggaaaatcacgactgagggtgaagagtttaccaacaaccctgtgatttgc
tttgatgaggtgcagaagtgtgtgtgcgatgctttggaggatgattcttcgtggcaatct
gactttatgatggaaggagaacaagacccaaccattaacagtgagcccaaaagagatgat
aaggacaccaagaaatatggagagaaatgcaagaagataatgaagtcctgtctaaacacg
ttgcccaagttttttcacaagaaccgttgcaagtacgaatacccagccaaggcgtcgact
ttcccccgatcgatcgttagaagagtcccagtaaataggagtcatacactgcctaaatgc
aaattaggtatagaaacactgccagtgcccggtgcgaggcataaccggtctcgctctgac
atcgtcggcaacttcgcgcagaagatgatcaacgaaagttcaggtccatcaaatttatcg
tccgctaacacgagcaacctgtcattatcacattcagaaattagtcaaaatgcaaagaaa
ttaatgtcacctttacaggcatctataattgaaacagctctggtgcaagaaaagggaaaa
gcttttggcatatacgcaattgctgttactaggatatgtgacaacgaaatatggcatatt
tacaggcgatacagtgatttctatgatctccacagctctatcaaagacaagtggccagaa
ctaggccacctcccgttcccggcgaagaaaactttccagaacacatctcgaagcgtcctc
gagagtcgcaagcgcatgttgaacaactatttgatgaacctcgcgcagctggcaagagat
gcgcggtacatggcgctgctctcgcaggattacttgggagggttcctcagccccgagata
caagcggagaaacagagtagctctattgacgcgcttttcgtaaactcactgagggctggg
atgcgaacgctgaaaaacatgcctgatcaatttgccaatacggtcgacggcgtcatggat
ggtatttctaaggtgtttcaaggcaaaggcggtgagaattacaccgatatcaaacccggg
aattcatcagacgctcaagatgatggcgacgagagtgtagctctgcgactgttggaagaa
gtgctcggcatcagagggttgtggctgcggcgtcggctgctggctcctctacggaccctc
atcgcagatcgagtcaatagaaaattgctagagttggtgtcgtcgctgacgtcacctcgg
aatgtcgttcaatatttgaaaacgttcaagcagtggttgaccagtaggaacaatccggcc
tccgagtattcccgcgacgcggccaccagggcgagaacgagagtcgctgctaaagttgct
ctgctcaccgcctccacagacgagctaagacacatagtaggctctgatgcggcgaggcgc
ggcctgctgaccgtattcgatctgttccaaacgcaggagatcaacaaaaggcttacactt
gtgttattagaagcaactttagcaaacttgtttccagacaacaaatttccggaattgttc
aaaaaactgtacactaattcaccaagagtgcctgcgcctaagaaaaatgttaatgtatag
DBGET
integrated database retrieval system
