Choristoneura fumiferana (eastern spruce budworm): 141428273
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Entry
141428273 CDS
T11020
Symbol
Prp31
Name
(RefSeq) pre-mRNA processing factor 31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141428273 (Prp31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfum03041
]
141428273 (Prp31)
Spliceosome [BR:
cfum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
141428273 (Prp31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Erf4
Motif
Other DBs
NCBI-GeneID:
141428273
NCBI-ProteinID:
XP_073944270
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Position
5:complement(16704289..16722562)
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AA seq
499 aa
AA seq
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MSLADELLADLEENDDGELEAVIENKTSTDVAHEFAIPRSVIPMEEDIKSVTIRELAKLR
HSDRLQRVLTEIERNVGNDRKKIEVTGLMESDPEYQLIVEANNIAVEIDGEIAIIHRFVR
DKYQKRFPELESLIVTPLEYIRTVKELGNDLDKAKNNETLQSFLTQATIMVVSVTASTTQ
GKILTESELEEIFEACDMASDLNNFKSSIYDYVESRMTFIAPNITAILGASTAAKILGVA
GGLSKLSKMPACNVLPLGQQKKTLSGFSQAASLPHTGFIYFSQIVQDTTPELRYKAAKLV
STKLILAARVDACHESTDGHIGRQLREGIEKKLDKLQEPAPVKFVKPLPKPIEQSRKKRG
GKRVRKMKERYAMTEFRKNANRLNFADIEDDAYQEDLGYTRGTIGKSSTGRVRLPQIDEK
TKVRISKTLQKNLHRQNQQYGGATSIRRQVSGTASSVAFTPLQGLEIVNPQAAETRVNEA
NAKYFSNTSGFLSVGKTTT
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagcagacgaattgctggcagatttggaagagaatgacgatggagaactcgag
gcagttattgagaacaagacatcgactgacgtggcccatgaattcgctatacctcgatca
gttattcccatggaagaggacataaaaagcgtcactataagagagctagcaaagttgagg
cattcggaccgccttcaaagggtattgacagaaattgaaagaaatgttggcaatgatcgt
aagaagattgaagttacgggattaatggaatctgatccagaataccaacttattgtggag
gctaacaacattgctgtcgaaatagatggagaaatagctattatccacagatttgtcaga
gacaagtatcagaaacgatttccggagttggagtctctgattgtcactccgctagagtac
atccggactgtaaaggagcttggaaatgatcttgacaaggccaagaataatgaaacgctg
cagagtttcttgactcaagccactattatggttgtttctgtgacagcatctacaacacaa
gggaaaatattgacagagagtgaactagaagaaatatttgaagcatgtgacatggctagc
gatttaaataattttaaatctagcatatatgactatgtcgaaagtagaatgacgtttatc
gcacctaacatcactgctatcctaggagcatcaacggcagccaaaatcctcggagtagcc
ggcggattatccaaactgtccaaaatgccagcctgcaacgtgctgccccttggacagcag
aagaaaactctgtcaggattttcacaagctgcctcgctgcctcatactggatttatttat
ttctcgcaaatcgttcaggatactacgcctgaactacggtacaaggcggctaagttggtg
tccactaaactgatactggcggcgcgagtggacgcctgtcacgagagtacggacggacac
atcgggcgacagctgcgcgagggcatagaaaagaagctggacaaattacaggaaccagcg
ccagtgaagttcgtgaagccgctgccaaagccgatcgagcagagccgcaagaagcgaggc
ggcaagcgcgtgcgcaaaatgaaggaacggtacgcgatgaccgagttcaggaagaacgcg
aaccggctcaactttgctgacatcgaagacgacgcctatcaagaagacttaggctacacg
cgcggcacgatcggtaaatcgagcacaggccgcgtccgcttaccccaaatagacgagaag
acaaaagtccggatcagtaagaccctacagaagaacctgcaccgacagaatcagcagtac
ggcggcgccacgagcataaggagacaggtgtcgggtaccgcgtcatcggtggccttcaca
ccgttacagggtttggaaatcgtgaatccacaagcggcagagacgcgcgtcaatgaggct
aacgccaaatacttctcaaatacatcgggtttcttatctgttggaaagacgactacttga
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