Choristoneura fumiferana (eastern spruce budworm): 141428389
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Entry
141428389 CDS
T11020
Symbol
Elp2
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfum03016
]
141428389 (Elp2)
Transfer RNA biogenesis [BR:
cfum03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
141428389 (Elp2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
141428389
NCBI-ProteinID:
XP_073944472
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Position
5:21450673..21495666
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AA seq
767 aa
AA seq
DB search
MRIKFNEKMKVSVSEIYTSVACNRIPEIIDWNEEGIICYGATNAVVIYDTNVKCGNPIKV
LCHHKSKVNSVKWLCKPDSTCTELVSCSADKTAAIWTLVDNVWKVTSTLSGHTDGVTCVH
GLYTEENNLLVFTGSIDSTVRVWERKNGTTNLKQTICLNYGLCLTLYAHLLPSSKTILFC
ALDDHKIHLFAGDEFHRVHTLVGHEDWVRGLDVLDVDATTIMLASASQDTYIRLWRIQAY
EEQSTAGIKVEERVFPAYGQEWAVKLDAVLAGHEGWVYGVQWHPYAVGADGTKKPVYRLL
SSSLDKTLIVWEPEGGSAQGAWTERVRVGEVGGSGLGFYGSRFGPRGGAILGHGYNGSFH
IWELDKETAQWAPRVVAGGHYGRVEDAAWAPGAAHLVSVAADQTTRLHAPWHRPDGSTEW
HELARPQVHGYDMAAVALVSARVLASAAEEKVVRVFAAPANFDANYANIVGAPLPGRSEG
AEGASVPSLGLSNKAVFADEDDNDGYFVPVNLTEPPTEETLMQHTLWPEQQKLYGHGYEV
FALAAAPDGSLLASACKATTREHAAILLWETSTWHQIQKLPCHQLTITQLAFSPDSRHLL
SVSRDRSWYLHTRSGDQFQLAANTDKTNGVHTRIIWCCAWASDSGVFGTGSREGKVCIWS
KAEPSSSSLGDYALLGTPLELPKDSVTALAFAPLTDSVVAVGLDSGRIGFYSFDVQRWTL
LKELDYSAAHHMTVRRLSFKPKDEDREMLLASAGADHLVRIYSVYIS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaggataaaatttaacgaaaagatgaaagtcagtgttagcgagatttatacctcggtt
gcgtgtaaccgtataccagaaataattgactggaacgaggaagggatcatttgttatgga
gcgacaaacgctgttgttatttacgatacgaatgtgaaatgcggcaaccctatcaaagtg
ctctgccatcacaagtccaaagtgaactctgtaaaatggctttgtaaaccagatagtacc
tgcacagaactagtttcttgctctgctgacaaaactgctgcaatttggaccctagtggac
aatgtttggaaggtaacaagcactttaagtggacacacagatggtgtgacttgtgtacat
gggctttatactgaagaaaacaatttacttgtgttcactggatccatagactcaactgtt
agagtttgggaaagaaaaaatggcacaacaaacctcaagcagactatctgtctcaactat
ggactctgtctcactctgtatgctcaccttctgccgagcagcaagacaatactgttctgt
gccttggacgaccacaagatacatttgtttgccggagacgagttccacagagtacacaca
ctggtgggacatgaggactgggtgagggggctggatgtcttggatgttgatgccacgacg
ataatgctcgcctcagcttcccaagacacgtacatccgtctctggcgcatccaggcttat
gaggagcagtccactgctgggatcaaggtagaggagagagtgttcccggcctacggacag
gagtgggcagtcaagcttgacgctgtactggctggacatgaggggtgggtgtatggagta
cagtggcatccgtatgcagttggtgcagatggcaccaagaagcctgtgtaccgtctcctc
tcgtcttcactcgacaagaccctgatcgtatgggagcccgagggtgggagcgcgcagggt
gcgtggacggagcgcgtgcgggtgggggaagtggggggcagcgggctcggcttctacggc
agccggttcgggccgcgagggggggcgatactggggcacgggtacaatggctccttccat
atatgggaattggataaggagaccgcccagtgggcgcctcgcgtggtggccggcgggcac
tacgggcgtgttgaggacgcggcctgggcgcccggggccgcccatcttgtcagcgtcgcc
gccgaccagaccacgaggctgcacgcgccgtggcataggcctgatggtagcacagaatgg
cacgagctagcgcgcccgcaagtgcacggctacgacatggcggccgtggcgctggtgtcg
gcgcgagtgctggcctccgcggcagaggaaaaggtcgtccgcgtgttcgccgcgcccgcc
aacttcgacgccaactacgctaacatcgttggcgcgccgctgcctggccggagcgaaggc
gcagaaggcgcgtcggtgccgtcgctggggctgtccaacaaagctgtgttcgctgacgaa
gacgacaacgacggatatttcgtgcccgtcaacttgacagagcctccgacagaagagacc
ctgatgcagcacacgctctggccagaacagcagaagctgtacgggcacggctacgaggtg
ttcgctctggcggcggcgcctgacggctcgctgctcgcctcggcttgcaaggccacgacc
agagaacacgccgccatccttctgtgggaaacatcgacctggcaccagatccagaagctc
ccgtgccaccagctgaccataacccaactggccttcagcccggacagccggcacctgctc
tccgtgtcgcgggaccgatcgtggtacctccacaccaggagcggcgaccagttccaactg
gccgcgaataccgacaagactaatggggtgcacaccaggattatttggtgctgcgcgtgg
gcgagtgactcgggtgtgttcgggactggctccagggaaggcaaggtctgcatttggtct
aaagccgagccttcctcgtcgtcgcttggcgactacgccctcctagggacgccactggag
ctcccgaaggattcggtaacagcgcttgccttcgcgccgctgaccgacagcgtggtcgcc
gtcgggctggactcgggaaggatcgggttttactcgttcgacgtgcaacgatggacgctc
ctcaaggagttggattatagtgccgcgcatcatatgaccgtgcgcaggttgagcttcaaa
ccgaaagacgaggacagagagatgctgctggccagcgcgggcgcagaccacctcgtgcgg
atctacagcgtgtatatatcttga
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