Choristoneura fumiferana (eastern spruce budworm): 141428411
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Entry
141428411 CDS
T11020
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1A-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04013
MAPK signaling pathway - fly
cfum04120
Ubiquitin mediated proteolysis
cfum04137
Mitophagy - animal
cfum04310
Wnt signaling pathway
Brite
Enzymes [BR:
cfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141428411
Ubiquitin system [BR:
cfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
141428411
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
141428411
NCBI-ProteinID:
XP_073944503
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All DBs
Position
5:complement(20513412..20516408)
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AA seq
281 aa
AA seq
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MSTSKRRGGASGSSCAVSGVAALASVPTAMSADLASLFECPVCFDYVLPPILQCQSGHLV
CSSCRPKLSCCPTCRGPLGNIRNLAMEKVASNVMFPCKHSNTGCTVTLVHTEKAEHEEAC
EFRPYSCPCPGASCKWQGGLDQVMPHLMMSHKSITTLQGEDIVFLATDINLPGAVDWVMM
QSCFNHHFMLVLEKQEKFDGHQQFFAIVQLIGSRKEAENFAYRLELNGHRRRLTWEAMPR
SIHEGVSSAIMNSDCLVFDTSLAQLFADNGNLGINVTISIA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgagcaagcggcgcgggggagctagcggttccagttgtgctgtgtcgggggtt
gcggcgctggccagtgtgcccaccgccatgtcggccgacctcgcctcgctgttcgagtgc
cccgtatgcttcgactatgtcctgccgcccatcctgcagtgccagagtggccacttggtg
tgctcgagctgccgccccaagctttcctgctgccccacctgccgtgggcccctgggcaac
atccgtaacctcgccatggagaaagtggctagcaacgtaatgttcccctgcaagcactcc
aacacaggctgcactgttacccttgtacacactgaaaaagctgaacatgaggaagcgtgc
gagttcaggccctactcctgtccatgccctggcgcgtcgtgcaagtggcagggcggtcta
gaccaagtgatgcctcacctaatgatgtcacacaaaagcatcaccaccttacaaggagaa
gacatagtgtttctggctacagatataaaccttcctggagccgtggactgggttatgatg
cagtcatgcttcaatcatcacttcatgctagttcttgagaaacaagagaaatttgatggg
catcagcagttttttgcaattgtgcagctaataggttccaggaaggaggcagaaaacttt
gcctacaggttagagttgaatggccaccggcgccggcttacctgggaggccatgccacgc
tccatacacgaaggggtctcctcagccattatgaattctgactgcctcgtttttgacaca
tcgcttgcgcagctttttgctgacaatgggaaccttggaataaatgtcacaatatctatt
gcctaa
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