Choristoneura fumiferana (eastern spruce budworm): 141428418
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Entry
141428418 CDS
T11020
Symbol
l(3)mbt
Name
(RefSeq) LOW QUALITY PROTEIN: lethal (3) malignant brain tumor
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
141428418 (l(3)mbt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfum03000
]
141428418 (l(3)mbt)
03036 Chromosome and associated proteins [BR:
cfum03036
]
141428418 (l(3)mbt)
Transcription factors [BR:
cfum03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
141428418 (l(3)mbt)
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
141428418 (l(3)mbt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
Motif
Other DBs
NCBI-GeneID:
141428418
NCBI-ProteinID:
XP_073944510
LinkDB
All DBs
Position
5:21672304..21692239
Genome browser
AA seq
1462 aa
AA seq
DB search
MERQQCNSLQNFDESKSEILKKRLLKSSSAPVCTNLAATGSHQNVLLNTLRAPISSSMIV
TSVGSGQGGLPLQHGLVTHSLAPVKLHTNPSSYPLQLSTVHVPVQIPGTSSNINVPVQLS
GPTSSMPLQIAPVSLPIQVSGTTNVPVQLPAGETINVPLQIPGTSQNIQLGGPGLSSMPI
LQNTSQPLSSIIHVHMGSNPRPNNIDGTEMTATSSSQQHNNGTSVSQVQVANHSTMLQMP
NSASNSIQLTLPNSVSSGTVQLRGSTRNMPHVVYIQTPTGLKPVTSTDVISQASTSGNPP
QIIVRRPVTSNSNIHLISNVNNKPNIAPKLPGHGKSSILAPTPTPPIVIQKPKTNEKVIV
PVSIAPGNSGKQTIAYLSSVKKPNSKNLTDNQSILISNNQSNVNSNNQKLFLTPMNMPKI
QNTTTKYILPVTLPATMASKGPIINLQIANGQIQNDPQGNITVMRDSAQLESTDMPPLQP
LGKMVNVNGKESNSVSQSANKCETYTISIPGSRAEPTGEQGEYTLSIPETNASMNDDIYT
VSIADDEGGQSREKSFTLAIPEKGKSLLNRNMIERNDIGSHHVAVAAPAILRRSNSDNGE
RKNANANLKRRISLCNENLSNKNPKTSQPSPPKPPENPKTVEAQDTENDDHRVPSLFCDE
KLDKDLECKVILGDSDEDYKDETKDSKSESEQHPMYYKRSNPSQQEGACRAKRESVDSAL
EEDPPGLLWSNGVARLHGSALQFQTNEFGLIDVVDASDPESPPPPPLAPRAKYHTPLKQR
VERARQPKPASPEDLYRCEGCGCHGMAADFITPDFCSLACQTEVRKLAQKKRDRERAELT
RRRNKMKKLLMRKPALDDAPPPPPQPDGPRKPESVGEMTEAMLKMSEDLIENEKYPWMCG
KNGFSWMRYLDFCKAKAAPVKLFKDPFPYNRNGFKVGMRMEAIDPQHASLFCVVSVREVQ
GYRLRLHFDEYPELHDFWVNADSVDIFPAGWCERNGRALRPPHSHAAAAAAFSWPLYLKQ
VRAIAAPRHLFSHITTTTLKPNGFRIGMKLEAEDRINDMVCAATVADMLDARLLITFDSW
DSVYDVWADPTSPYIHPVGWAEENDIALTPPNFYKDPESFSWESYLAETGAAAAPXRAFK
TRAPQGFKPGMKLEVVDKRVPFLIRVASVSAVKGHQVRVSFDGWPDELSYWLDDDSPDIH
PVGWCLKTGHPLEPPLTSEELSTAGPCGVGGCRGLGSLRGGAHKTHVAASACPYRAPASP
APQDRLAAHPALTAPRVLGPPKPAETLTPTSDTVKEKPTRGRPPKHKRVEEVSKTDPVSD
EESASSSGGSAKRWRGEGDGREEREVREERDGRDERDARDERERRAERSATDRARALQPD
VARHVAALQLPSQPDVWTQEDVSALVGRVAGAAAGAAARRARLAGRELLMASCEELVACL
RLRLGPAVKVYGAVRQLRRVVS
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggagagacagcagtgtaattcacttcaaaactttgatgaatcgaaaagtgagatattg
aaaaaaagattattaaaatcgagtagcgctcccgtgtgcactaatctagccgctaccggc
tcacatcagaatgttctactgaatactttgcgtgcgccaatttcgagcagcatgatcgtg
acatcagtggggagcgggcagggcggactgccgctgcagcacgggctcgtgacgcactcg
ctagcgcccgtcaagctgcacaccaacccttcctcataccccctgcagctgtctactgtc
catgtgccagtacaaatacctgggactagctccaacatcaatgtccctgttcaattgtct
ggacccactagcagtatgcccctgcaaatcgctccagttagtcttcctatacaagtttca
ggaacaactaatgtgcctgtacagttaccagcgggagaaactattaatgtacctttgcaa
attcctggaacaagtcaaaatattcagcttgggggcccgggactgtcctccatgcccatt
ttgcaaaatactagtcagcccttgagttctataatacatgtgcacatgggatctaacccc
aggccaaacaatattgatggcactgaaatgactgctaccagctcctcgcagcagcataat
aatggaacttctgtgtctcaggttcaagtggcaaatcattctacaatgctgcaaatgcca
aattcagctagtaactctatacagctcactctccctaattctgtgagctcgggaacagtg
cagctacgagggtccaccaggaacatgccacatgtggtgtacatccagactccaacaggc
ctaaagcctgttaccagtacagatgttatcagtcaagcaagcaccagtggaaacccaccg
caaattatagttcgaagaccggtaaccagtaattctaatatacatctgatatcaaatgtc
aacaataagccaaatattgcgccaaaactgcctggccacggcaagtcgtcaatcctggcc
cccaccccgacaccccctattgtcattcaaaaacccaaaaccaatgaaaaggtgatagtg
ccagtcagcattgctccaggaaattcgggcaagcaaaccatcgcttacttgagctctgtt
aaaaaacccaattccaaaaacttaactgacaatcaatccatcttgatttcaaacaatcag
tcaaatgttaactccaataaccagaaactatttttgactccaatgaacatgccaaaaatt
cagaacactactactaaatatattttaccagtgacactcccagctacgatggcgtccaaa
gggccaattatcaatctgcagattgcaaatgggcaaatacagaatgatccgcagggaaac
attactgtgatgagagatagcgcgcagctcgagtccacagacatgccgcctttgcagcca
ttggggaaaatggtcaatgtgaatggcaaagagagcaattcagtatctcagagtgcaaac
aaatgtgaaacatacactatatccattcctggctctcgagccgagcccacaggagaacaa
ggggagtatactctctcaataccggaaacaaacgcctccatgaatgatgatatctacacc
gtatcaatagctgacgacgagggaggccaaagccgcgagaagtccttcaccctggctata
ccagagaaaggaaagagtttattgaacaggaatatgatagagaggaacgatattggttcc
caccacgtcgcggtcgccgcacccgctattttgaggcgctcaaactcagacaacggtgaa
aggaaaaatgctaatgccaaccttaagcgccggatatcattatgcaatgagaatctttcc
aataaaaaccccaaaacgagtcagccgagtccaccaaagcctcccgaaaatccgaaaact
gtcgaagcgcaggatacggaaaacgacgaccaccgcgtgccttcactattttgcgacgaa
aagctggataaggacctcgaatgcaaagtcatactcggagactccgacgaggattataaa
gacgaaacgaaagacagcaaatcagaaagcgagcagcacccgatgtactacaagagaagc
aatccgagccaacaggagggcgcgtgccgcgcgaagcgggagagcgtggacagcgcgctg
gaggaggacccgcccggcctgctctggagcaacggcgtggcgcgcctgcacggcagcgcg
ctgcagttccagaccaacgagttcggcctcatcgacgtcgtggacgccagcgaccccgag
tcgccgccgccgccgccgctcgccccgcgtgccaagtaccacacgccgctcaagcagcgc
gtggagcgcgcgcgccagcccaagcccgcctcgcccgaggacctgtaccgctgcgagggc
tgcggctgccacggcatggccgccgacttcatcacgcccgacttctgcagcctcgcctgc
cagaccgaggtgcgcaagctcgcgcaaaagaagcgcgaccgcgagcgcgccgagctcacg
cgccgtcgcaacaaaatgaagaaactgctcatgcgcaagccggcgctcgacgacgcgccg
ccgccgccgccgcagcccgacgggccgcgcaagcccgagtccgtcggcgagatgaccgag
gccatgctcaagatgtccgaggacctgatcgagaacgagaagtacccgtggatgtgcggc
aagaacggcttctcctggatgcgctacctggacttctgcaaggcgaaggcggcgccggtg
aagctgttcaaagacccgttcccgtacaaccggaacgggttcaaagtgggcatgaggatg
gaggcgatagacccgcagcacgcgtcgctgttctgcgtggtgtcggtgcgggaggtgcag
ggctaccggctgcggctgcacttcgacgagtacccggagctgcacgacttctgggtcaac
gccgacagcgtggacatcttcccggcgggctggtgcgagcgcaacggccgcgcgctgcgc
ccgccgcactcgcacgccgccgccgccgccgccttctcctggccgctctacctcaagcag
gtgcgcgccatcgccgcgccacgacatctcttctcgcacatcaccaccacgacactgaaa
cccaacggctttcgcatcggtatgaagttagaagccgaggatcgcatcaacgatatggtt
tgcgccgcgaccgtggccgacatgctggacgcgcggctgctcatcaccttcgactcctgg
gactccgtgtacgacgtgtgggcggaccccacctcgccctacatacaccctgtgggctgg
gccgaggagaatgacatagcgctgacgcctcccaacttctacaaggacccggagtcgttc
tcgtgggagtcttacctagcggagacgggggcggcggcggcccccncgcgcgccttcaag
acgcgcgccccgcaagggttcaagcccggcatgaagctggaagtggtcgacaagagggtc
ccgttcctgatccgcgtggcgagcgtgagcgcggtgaagggtcaccaggtgcgcgtgtcg
ttcgacggctggcccgacgagctgtcctactggctggacgacgactcgcccgacatccac
ccggtcggctggtgcctcaagaccggccatccgctggagccaccgctcacgtctgaggag
ctgtcgacggcgggcccgtgcggcgtgggcgggtgccgcgggctgggctcgctgcgcggc
ggcgcgcacaagacgcacgtggccgcgtccgcgtgcccgtaccgcgcgcccgcctcgccc
gcgccccaagaccgcctcgccgcgcaccccgccctcaccgcgcccagagtcctgggtcca
ccgaagcccgccgaaactctgacgcccacaagtgatacggtcaaagagaaaccaacaagg
ggtaggcctccaaagcataagagagttgaagaagtatcaaaaactgatccggtgtcagac
gaggagtctgcgtcgagcagcggcggcagcgccaagcgctggcgcggcgagggcgacggg
cgggaggagcgtgaggtgcgggaggaacgcgatgggcgggacgagcgcgatgcgcgggac
gagcgtgagaggcgcgcggagcggagcgcgacagaccgcgcgcgcgcgctgcagcccgac
gtcgcgagacacgtggccgcgctgcagctgcccagccagcccgacgtctggacgcaggaa
gatgtgtcggcgctggtggggcgcgtggcgggcgcggcggcgggcgcggcggcgcggcgc
gcgcggctggcgggccgcgagctgctcatggcctcctgcgaggagcttgtcgcttgcctg
cggctgcggctcggccccgccgtcaaggtttacggagccgtccgccagctgcgccgcgtc
gtgtcctga
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