Choristoneura fumiferana (eastern spruce budworm): 141428600
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Entry
141428600 CDS
T11020
Name
(RefSeq) uncharacterized protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfum03016
]
141428600
Enzymes [BR:
cfum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
141428600
Transfer RNA biogenesis [BR:
cfum03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
141428600
Prokaryotic type
141428600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
141428600
NCBI-ProteinID:
XP_073944703
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All DBs
Position
6:complement(5062285..5099876)
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AA seq
1183 aa
AA seq
DB search
MTRQKKPRLTEFEEFTHDDTDYYAALDPHKKKITEKVLMDLQMKGNCSVSYICTLKKRLG
TLDLAKCVELGVKPGPMLGQLKSGHDVILPDGRLVLSKDVKTPDDPGPVFIVLDVADISY
LKEADFAAHFDNGVNPPENIPTVIVHMSPPQVFHHPTYKSFMTMFGPSTRHLVLNSQNLC
LGSEAVHRTQHKLHLLDPDIFPLLRDVSVPAEWNAHPPLPRTDSPVKLKGFEDLKNRIAI
AQFQNIINMESQVGDSAALTDSTAAGKLEIYSARTLTMFHLRPKKQLDRSAEPKLHVQNY
YQETMDVDGFVGSLQQFRHLVDGVRYAKSNSINEYPKIVFLGTGSCIPSKTRNTSGIIVH
IDEKSSILLDCGEGTFGQMVRFYGPRKVNEVLRTLKAIYISHLHADHHIGLIGVLQARFE
AFLTPSEASQPVYLLAPGQIVTWLTIYDQHFERITNEFTLVPNQTLVSENPSEMTSANLA
SIGLESIRTCLVPHCPNAFGVSFVVAGHKITYSGDTLPSDKLVAIGENSTVLIHEATMED
ELADEARKKMHSTTSQAIDVGRQMNAQYTVLTHFSQRYARLPRLNPHILHDNNTVGIAFD
NMQITMNDLELLPHMYAPLQLMFAEHCVEMELKAAHRERRRERRVSSPALVPGDSGGQPH
AHQEPRPRESPAPRGVVSAPPSRAQAHYRESHASRLRQQLKGMSNTGPFGPPRSKSSSPT
KLSRRSLTSDNYSPHSRSRTSSTDKPVDLIQTPRTLSDSSSMRSLTKDTQDILRIITNPP
SCCTFDCQSKIMNKYHPGPGSSTTSRHSASSIADSKNSYSPRQRSGYKLTPASDRSKTTN
KSRGSASTSRNSAASIDDIRPSTGSRNENEPKTPTKPNTVTSNLTAKQSVASIDDVRMTN
RVKSGCVITAANCNAEIGYGKPLVTPVNKRLTIRRDIMQLSHVINPPANEVCHRKKSPIR
PWRAANSVDPVSKPASMYNKSYAGGTQPSSKCAGNKLRASLTNPNVKADRPAVKNPGAAN
VQRPMSSSTRRANISPSKASVVSDAVVSSKTYIPFRSNQKVSSNTNNSAKDPTRRPQKDD
NCSKPYYCRDIKQMSGRPSAISQGSKVYKPQLEDIKSSFLLLNKITKARIDGRKAPPIPK
PQPYSESERKAILMESKTKFKSKNFWNDAKYDRIEGLNWISWK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgacccggcagaagaaaccacggctcaccgagtttgaagagttcactcatgatgacact
gactattacgctgcccttgatccgcataagaagaaaataactgagaaggttctgatggat
ttgcaaatgaagggcaactgttctgtctcatacatttgcactctaaagaaacgtctaggg
accctggacctggcgaaatgcgtggagttgggcgtgaagccaggcccgatgctggggcag
ctgaagagtgggcacgacgtcattctgccggacggcaggctggtcctgtccaaagacgtc
aaaacgcccgacgacccgggccctgtgttcatagttctagacgtggcagacatatcgtac
ttgaaggaagcagacttcgcggcgcattttgacaacggcgtcaaccctccagagaacatt
ccgacggtcatcgttcacatgtcgccgccccaagtgttccaccatcccacttacaagtcc
ttcatgaccatgtttggtccttccacccggcatctggtgctcaactcccaaaatctgtgt
ttgggttcggaggcagtacatcgcactcagcacaaactacacttgctggaccctgacata
tttccgctgttgcgagacgtcagcgtccccgcggagtggaatgctcaccctcccctcccc
agaactgatagtccggtcaagctaaaagggttcgaagatctcaagaataggattgcgata
gcgcagttccagaacattataaacatggagagccaggtcggagacagcgcggcgctgacg
gactcaacggctgcaggcaaactagagatatactcggcgcgtacgctgactatgttccat
ctgcgtcctaagaagcagctcgacaggtcagcagagccgaagctccacgtgcaaaactac
taccaggagaccatggacgtcgacggctttgtcggcagtttgcagcagttccgccatcta
gtggacggtgtgcgttacgcgaagagcaattcgattaatgaataccctaaaatcgtattc
ctcggcaccgggtcgtgcatacctagcaagacaaggaacactagcgggattattgtgcat
attgatgagaaaagctctattcttctggattgcggcgagggcacttttggtcaaatggtg
cgtttctacgggccgaggaaagttaacgaggttctgcggacactgaaggcgatatacata
tcacatttacacgccgaccatcatatagggctgatcggagtactgcaggcccgttttgag
gcgttccttaccccttctgaggccagccagcccgtgtacttgctagctcctggacaaatc
gtcacgtggctgactatctacgaccagcactttgaacggatcaccaacgagttcactctc
gtaccaaaccagaccttggtgagcgagaatcctagcgagatgacttcggctaacttggcc
agtataggcttggagtcaatccggacgtgcctggtgccgcactgccccaacgcgttcgga
gtttcgttcgtcgtggctggacacaagattacttacagcggcgataccctgcctagcgac
aagctcgtggcgatcggcgagaactcaactgtcctcatccacgaagcaaccatggaagac
gagctggcggacgaagcgcgaaagaaaatgcactcgacaacctcacaagccatcgacgtg
ggtcgacaaatgaatgcacagtacaccgtgctgactcacttcagccagcgttacgcgcgt
ctgccgcgactcaatccgcacatactgcacgacaacaacactgtcggcatcgcgtttgac
aacatgcagataacaatgaacgacctagaactcctgccgcacatgtacgcgccgttgcag
ctgatgttcgccgaacactgcgtcgagatggagctgaaggcggcgcatcgcgagcgacgc
cgcgagcgccgcgtctcgtcccccgccctcgtccccggtgactctggagggcagccgcat
gcgcaccaggagccgcggccgagggagtctccggccccgcgcggtgtggtgtccgcgccg
ccgtcgcgcgcgcaagcacactacagggaaagtcacgcttcaaggctacggcagcagctt
aaaggcatgtcgaacacgggccccttcggtccgccgcgcagcaagtcttcttcgccgacg
aaactgagcaggcgatcactaaccagtgacaattactcgccccactcccggtcccggacc
tcgtcgacagataaacctgtagatctcatccaaacacctcgcacgctgagcgattcttcg
agcatgcgcagtctgaccaaggatacgcaagacattctgcgaatcatcaccaacccgcct
tcttgttgcacgtttgattgccaatctaaaattatgaacaagtaccaccccggtccgggg
tcctccacgacatcaaggcacagcgcgtccagcatagctgacagcaaaaacagctacagc
ccgagacagagatccggttacaaactcacgcctgcctctgatcgttccaaaactacaaac
aaatctagaggctctgcatcaacctcaagaaatagcgccgcaagcatcgacgacatcaga
cccagcactggatcgcgaaatgagaatgaacctaaaactccaactaaacctaatactgtt
acaagtaatttaactgcaaagcagagcgtcgctagcatcgatgacgtgagaatgacaaac
cgggtcaagtctggctgcgtcatcacagctgcaaattgcaatgccgaaattggatacggc
aagccattggtcacgccagtgaacaagagactgaccatccgaagggacattatgcagttg
tcgcatgttattaatcctcccgctaacgaagtttgtcacagaaagaagtcaccaatacga
ccgtggagagctgctaacagtgtggaccctgtgtcgaagccggctagtatgtataacaaa
agctacgctggtgggactcaaccatcgagtaagtgcgctgggaacaagttgcgagcgtca
cttacgaaccccaatgtgaaggcggaccggccggccgtcaagaaccccggtgcggctaac
gtccaaagacctatgtcgtcatcgaccaggagggccaacattagtcccagcaaagcatcg
gtagtgtcagacgctgtggtatcttcaaaaacctatatacctttccgaagcaatcagaaa
gtttcatcgaacacgaacaactccgccaaagacccaacaagaaggccacaaaaggatgat
aattgtagcaaaccatattattgcagagacattaaacaaatgtcgggtagaccaagtgca
atctcccaaggtagtaaagtttacaagccacagttagaagacattaaaagttccttttta
ctcttgaacaaaattacgaaagcaagaatagatggtaggaaagctccaccaatacctaaa
cctcagccatatagtgagagtgaacgaaaggcaattttaatggaatccaagacgaaattt
aaaagtaaaaatttttggaatgacgcaaaatatgatagaatagagggattgaattggatc
tcctggaaatga
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