Choristoneura fumiferana (eastern spruce budworm): 141428891
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Entry
141428891 CDS
T11020
Symbol
peng
Name
(RefSeq) pumilio and CPL domain-containing protein penguin
KO
K14844
pumilio homology domain family member 6
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfum03019
]
141428891 (peng)
03009 Ribosome biogenesis [BR:
cfum03009
]
141428891 (peng)
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
141428891 (peng)
Ribosome biogenesis [BR:
cfum03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
141428891 (peng)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
141428891
NCBI-ProteinID:
XP_073945040
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Position
6:5318176..5326560
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AA seq
637 aa
AA seq
DB search
MQKIKRKAGDTDTPAPKKKKVQFTEVVKAKKSDVTDEKKPKKPNITNGKKNFKNVPKKDF
TKAKPGTANKKFNQFDKSKGKFSKGKTFGKDKGGNQTNGEKPQWSEMKKEKKQLRIVRRK
AKTSAEVFEIANKAKLLAAQIQRKVVKPDFKKSSCKELHLLLKGQYKSIALTHDLSRVIQ
VLLKHGEEDIRNEITEELLDLMVPMVQSKYGQHAVKRILKYGSDAIRHKVINKFLGHIVS
LATHTISAPVLDFAYGEFASKKEKLHMQQEFYGDIYKNTKDDKVKTLTDTYKDSPEMKTA
ILQSCKANIQRILDKNLHDGELLHSVLYDYIRACSLEERVELVSTLGPLIVPLSNSLPGA
NTASICVWQGSNKDKKAILKVVKEHAVALAKHKTGYRLLLTIFDSVDDTVLVRKAIVSSL
QANFRELAKDHWGNMTLHWLVKPKDPAAFHPSLIKFLDEGFKSGTSKKDAELRVTELREA
ILPTLAQDIAADPQFWISDKSVMLLAVAVVAVDSNEEIVKALAQAICRPDWTISRDDKAL
LAIEDAGIHMCLKKLAALDKEKEGATLGRAVCDLLDDEAIQVWLPTNRGCFFLLKLIESN
SDKVANKLRKKIKPHTDLLKQQKTEGAKLLLQNVQKK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaattaagagaaaagcaggtgatacggatactcctgcgcctaaaaagaagaag
gttcagttcactgaagttgttaaagcaaaaaagtcggatgttactgatgagaagaaacct
aaaaaaccaaacattacaaatggaaaaaaaaactttaaaaatgtgcctaagaaagacttt
acgaaagcaaaacctggaactgccaataaaaagtttaatcaatttgataaaagcaaggga
aaattttcaaagggaaaaacatttggaaaagacaaaggtggaaatcagacaaatggtgag
aagcctcaatggtcagagatgaaaaaagagaagaagcaattgcgcatagtgcgacggaag
gccaagacttctgccgaggtgtttgagatagctaacaaggccaagctgttggcagctcaa
atccagagaaaagttgtcaagccagattttaaaaaaagttcctgcaaggaacttcacctt
ttactcaagggccagtataaatcaatagcgcttactcacgatttaagtagagttatacaa
gtgctgcttaagcatggtgaagaagatataagaaatgaaataacagaagagcttcttgac
ctcatggtgcccatggtgcagtccaaatatggtcaacatgcggtgaagcgtatactgaag
tatgggtcagatgcaatccgccataaggttatcaataagttcctgggccacatagtctca
ctggccacccatacaatcagtgcgcctgtactggactttgcctatggtgagtttgcaagc
aagaaagaaaagttgcatatgcagcaagagttctatggagacatctataaaaataccaag
gatgataaagtgaaaacccttactgacacatacaaggacagcccagagatgaagactgcc
atcctccagtcttgcaaggccaacatacagagaatcttggataagaatcttcatgatgga
gaattgctgcactcagtcctctatgactacatccgcgcctgcagcctggaggaacgcgtg
gaactagtgagcacactcggcccactcatagtgccactgagcaatagcctgcccggtgcc
aacactgccagtatatgtgtatggcaaggctccaacaaagacaaaaaggcaatactgaaa
gtagtaaaggaacatgcagtagctctggcaaagcacaagacaggctaccgtctgcttctc
actatctttgactctgtggatgacacagtgcttgtgaggaaggctattgtctcttcactg
caagccaacttccgggaactggccaaagaccactgggggaatatgacactacattggcta
gtgaagcccaaagacccagcagccttccaccctagcctcatcaagttcctggacgaaggt
ttcaagagcggaacctccaaaaaagacgcggaactaagagtgacggagctgcgagaggcg
atcttgccgacgctcgcgcaggacatagcagccgatccgcagttctggatcagcgacaaa
agtgttatgttactagctgtagctgtggtagcagtcgattctaatgaagaaatagtgaag
gcgctagcgcaagcgatctgccggccggactggacaatctcgcgcgacgacaaggctctc
ctggcgattgaggacgccggcatacacatgtgcctcaagaagttggcggcactggacaag
gaaaaggagggggctacgctcggaagagcagtgtgcgatctcctcgatgatgaggcgatt
caagtgtggttgcctacaaataggggctgcttcttcctgctgaagctcatcgaaagcaat
agcgataaagtcgcaaataaactcagaaaaaaaatcaaaccccacacagatctactcaag
cagcagaagacagagggcgccaaacttttgttacagaatgtacagaaaaaataa
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