Choristoneura fumiferana (eastern spruce budworm): 141428903
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Entry
141428903 CDS
T11020
Name
(RefSeq) protein shuttle craft-like
KO
K12236
transcriptional repressor NF-X1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfum03000
]
141428903
04121 Ubiquitin system [BR:
cfum04121
]
141428903
Transcription factors [BR:
cfum03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
141428903
Ubiquitin system [BR:
cfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
141428903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
141428903
NCBI-ProteinID:
XP_073945056
LinkDB
All DBs
Position
6:complement(5387504..5432027)
Genome browser
AA seq
1362 aa
AA seq
DB search
MSQWNNSYAYNQQYQGSGTWNGELGNQFSNQQFYPNAQPTYEPNNQYVNFQEFLSQMQGN
NAAAGGSVAFNNAQYQNYPGNQYEYQTAPSPQNPNNYYPPHSNAVSAAEGYQTTAQSHDR
NAPDSNYDNHMVFKSNLTPTATEFVPKGMSQVGQSGTVNTNPPDVSIAYNEVSESRRENN
AESSWRGKQSSQPSSSRSYDEPKNEQEPKIKLDKESYSSHSYNENKSEQDPRKKPEKDRR
RRNNESRNNINNVNNYRESNSQSNEHSGPNDPEGGDSESNSYRDGSRKQSSEYHSRNYDQ
NSRRNEPNGRNTRRNESSRQYEGSSRKYDNHNQNNESNNKNNDSDRNYDSNERNYSSRNN
DSDTRQYDSSSRNYDSGGRNYDNRRRNYESNNRHYEGGNRNNDSNSRSYDASSRNNDSGP
ARSNTDYNRRGDFNGRDSDYNSRNNDYNNRNEDYNSRNYDSNNRNYETNRGQVKNSKLKN
KEPDNRTFYNSSVNQSSQDVRSGRSDRGDSSARNRNWAGSQRVRPTERTDDEQYAKGYLD
NQEDRYSRGSRAEAMFSPSRNRHRQVDQGGNSDLTQRERLSEQLDKGTLECLVCCERVRQ
TDAVWACGNCYHVLHLRCIRKWAMSSIIEGKWRCPACQNTSDEIPSEYRCMCGAVRAPDY
QRGAGGAHTCGQACQRARSCPHPCSLPCHPGPCPPCQATVTRKCGCGAETRSVVCSSKLA
QLCGRVCERRLACAAHRCAQPCHEGPCEPCTSTVDQVCHCPAAKSRSVPCTAESGGTTSW
SCGAECSRVLACGAHVCREPCHAPPCAACRLLPAAVPSCPCGRTKLDPEARKACTDPVPL
CGNICAKPLPCGPAGDKHFCKLDCHEGPCPVCPDKTLLPCRCGHSSREVPCAELPQMLDN
VFCQKKCNKKLSCGRHRCRASCCAATSHRCGVVCGRLLACQLHRCEQFCHTGHCAPCTRA
SFEELTCECGAEVILPPVPCGAKRPACSAPCRRPRACPHPPHHACHEGDCPPCVVLTAKR
CHGQHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCQKICHKGPCDAGKCTQPCNEKRPSC
GHPCAAPCHAGAEGAAAGARAAGCPSAAPCRKLVRATCPCGRRAADRTCADNARDLAKIM
SVLAASKMQEGGSVDLSEVQRPASMLKTLECDDECRVEARTRRLALALQIRNPDVSAKLA
PRYSDHVRATAAREPGFARQVHDRLTELVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCE
QFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRKVPGPVLRAPASAPAP
AAASKSGSGWATLTSTNAWAARAQKKADDPPKIDYFDNPPDN
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtggaacaattcttacgcttataaccagcaataccaaggctcgggcacatgg
aatggagaattaggcaaccaattttctaaccaacaattctatccaaatgcccaaccaacc
tatgagcctaacaatcagtatgttaacttccaagagtttttgtctcagatgcaaggcaac
aatgccgccgccggaggttccgttgccttcaacaatgctcagtatcaaaattaccctggt
aatcagtatgaataccaaactgcaccatcacctcagaatcctaataattactatccaccg
cactcaaatgctgtcagtgctgcagaaggttatcaaaccacagcacaaagccatgaccgt
aatgcacctgatagtaattatgacaaccatatggtattcaaatctaatctcacaccaact
gccacagaatttgtgccaaaagggatgtcacaagtaggtcagtctggaactgtgaacaca
aacccaccagatgtctctatagcatataatgaagtgtcagaatccaggagagaaaacaat
gcagaaagcagttggcgagggaagcagtcttcccaacctagtagttcccgaagttatgat
gaacctaaaaatgaacaagaaccaaaaataaaacttgataaagaatcctatagttcacat
agctataatgaaaataaaagtgaacaggatccgagaaaaaagccagaaaaagatcgcagg
aggcgaaataatgaaagccgtaacaatattaataatgttaataactacagggagtccaat
agtcaaagtaatgagcacagtggccccaatgatcctgaaggtggtgattctgagtctaat
tcttatagagatggttccagaaaacaaagttctgagtatcatagtcgtaattatgaccaa
aatagcagaaggaacgaaccaaatggccgtaacactcgaaggaacgagtccagccgccaa
tatgaaggcagcagtcgcaagtatgataatcataaccaaaataatgaatctaacaacaaa
aacaatgattctgaccgtaattatgattcaaatgaacggaactattcaagtcgcaacaat
gactctgatacccgtcaatatgactccagtagtcgcaattatgacagtggcggccgtaat
tacgacaatagaaggcgcaactacgagtctaataatcgccattatgaaggcggtaatcgt
aataatgattccaatagtcgcagttatgacgccagtagtcgcaacaatgattctggacct
gcaagaagtaacactgattataatcgtagaggcgacttcaatgggcgggacagtgattac
aatagtcgaaacaatgactacaataatcgtaatgaagactacaatagccgcaactatgac
tcaaataatcgtaactatgagaccaacaggggccaagtaaaaaattccaaacttaaaaat
aaagagcctgacaatcgaacattttataatagttcagttaatcaaagcagtcaagatgtc
agaagtggacgaagtgacagaggtgacagttcagcaagaaacagaaactgggctggaagt
caaagagtcaggcctacagagagaacagacgatgaacaatatgctaaaggttacttagat
aaccaggaagacaggtattcaagaggatcaagagcagaagccatgtttagtccctcaagg
aatagacacagacaggtggatcaaggagggaactcggacctaacccagcgggagcgtctc
tcagagcagctagacaagggcacactggagtgcctggtgtgctgcgagcgcgtgcgccag
acggatgccgtgtgggcctgcgggaactgctaccatgtgctgcacttacgatgcatcaga
aagtgggccatgagcagtatcattgagggcaaatggcgctgcccggcgtgtcaaaacacg
agcgatgagatccccagcgagtaccgctgcatgtgcggcgccgtgcgcgcgcctgactac
cagcgcggcgccggcggcgcacacacttgcggacaggcatgtcagcgcgctcgctcgtgc
ccgcacccgtgctcgctgccctgccacccggggccttgcccgccctgccaggccactgtc
accaggaaatgcggttgcggagcggagacgcgctcagtggtgtgcagcagcaagctggcg
cagctgtgcggacgcgtgtgcgagcgccggctggcgtgcgccgcgcaccgctgcgcgcag
ccctgccacgaggggccctgcgagccctgcaccagcaccgtcgaccaagtgtgccactgt
ccggccgcgaagtcccgctcggtgccgtgcacggcggagagcggcggcacgacgtcgtgg
tcgtgcggcgcggaatgctcgcgcgtgctggcctgcggcgcgcacgtgtgccgcgagccg
tgccacgcgccgccctgcgccgcctgccgcctgctgccggccgccgtgcccagctgcccc
tgcggccgcaccaagctggacccggaggcgcgcaaggcgtgcacggacccggtgccgctc
tgcggcaacatctgcgccaagccgctgccgtgcgggcccgccggcgacaagcacttctgc
aagctcgactgccatgaaggtccgtgccccgtgtgccccgacaagacgctgctgccgtgc
cgctgcgggcactccagccgcgaggtgccgtgcgccgaactgccgcagatgctcgacaac
gtgttctgtcagaagaaatgtaacaagaagctgtcgtgcgggcggcaccgctgccgcgcg
tcgtgctgcgcggcgacgtcgcaccgctgcggcgtggtctgcggccgtctgctggcctgc
cagctgcaccgctgcgaacagttctgccacaccggccactgcgcgccttgcacgcgcgcc
agtttcgaggagctgacgtgcgagtgcggcgccgaggtgatcctgccgccggtgccgtgc
ggcgccaagcggcccgcgtgctcggcgccgtgccgccgcccgcgcgcctgcccgcacccg
ccgcaccacgcctgccacgagggcgactgcccgccctgcgtcgtgctcactgccaagcgc
tgccacggccagcacgaggaacgcaaaacgatcccgtgttcacaagaagaattctcttgc
gggctgccatgcgggaaacctctgccttgcggaaagcacacctgccaaaaaatctgtcat
aaaggaccttgcgacgccggcaaatgcacccagccgtgcaacgagaagcggcccagctgc
gggcatccgtgcgcggcgccttgccacgcgggggcggagggggcggccgcgggggcgcgg
gcggcgggctgccccagcgcggcgccgtgccgcaagctggtgcgcgccacgtgcccgtgc
ggccgccgcgccgccgaccgcacctgcgccgacaacgcgagggacctcgccaaaataatg
agcgtattggcagcttcgaagatgcaagaaggtggttccgtggacctgtccgaagttcaa
cgtccagcttccatgctgaaaacgctggagtgcgacgacgagtgccgcgtggaggcgcgc
acgcggcggctggcgctcgcgctgcagatccgcaaccccgacgtgtcggccaagctggcg
ccccgctacagcgaccacgtgcgcgccaccgccgcccgcgagcccggcttcgcgcggcaa
gtgcacgaccgcctcacggagctggtgcagctggccaagaagtcgaagcagaagacgcgc
gctcactcgttcccgtcgatgaactggcagaagcgtcagttcatccacgagctgtgcgag
cagttcggctgcgagtccgtcgcctacgacgccgagcccaaccggaacgtcgtcgccacc
gccgacaaggaaaagtcatggctgccggcgatgagcgtgctggaggtgctggcgcgggag
gccggcaagcgcaaggtgcccgggcccgtgcttcgcgcgcccgcgtccgcccccgcgccc
gccgccgccagcaagtcgggcagcggttgggccacgctcacgtctaccaacgcgtgggcg
gcgcgcgcgcagaagaaggccgacgatcctcccaagatcgattacttcgataacccgcct
gacaactag
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