Choristoneura fumiferana (eastern spruce budworm): 141428995
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Entry
141428995 CDS
T11020
Name
(RefSeq) LOW QUALITY PROTEIN: RAD50-interacting protein 1-like
KO
K20474
RAD50-interacting protein 1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141428995
Membrane trafficking [BR:
cfum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
141428995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Pox_G7
NagJ_C
PIN_8
Motif
Other DBs
NCBI-GeneID:
141428995
NCBI-ProteinID:
XP_073945223
LinkDB
All DBs
Position
6:9986388..9997531
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AA seq
823 aa
AA seq
DB search
MNEEDKQDIIQSFNIRIGDDINNLGNAYQIENELVARRDALQNSLRVVNTEVPTEISASI
DKAKKNCSHTAELKAKSEILQEKVDKFLTNTEPLRNELSKRFAAINKLEKVLCYLKSYAE
VDSLCSQLSTCTEDEVSVQIYSELKKLCIQYQEGHRGTYVKEYTHYWHNILKDRLTKQYE
DVLKQLKWPMVTGADNSPLPKDVLVKFYGLTKFLFLIEEPDDEQARMLSGDFSLENPCLP
VKILLRPLKKRFTFHFTGQRQTARLDRPEWFLTQTLTWIKDHQGFVKSHVQPLADKLNIR
HIRAVAEFNAGLISFAAERLHTVLGLYNTQGTKHENIADTDAAFAHAVDEALGFHRELVL
MTGHEANSVLSVLTKAEIFVRWLAVEKKYALAKLDETLDNEQWSEPIAGGNGSAVGTVIW
VPRGADWFIALLKTIEDRYAVLPQPGHRLQFLELQLELVEEWRVRLTQIMSAALGALEAD
SFLAGGARDPLSAVVNAAHYSREVLLQWAHSLHYLQLHYYRRQFQHFTHQQHQEDSESLG
SDDENDDDKRGKEKSDSEDEALSLKDVEQKAKNLALDELTRRNSAMPELSQFDIMSPTGT
RNVPELTSQAAEEAGVWAEAPGLLGRLRDAGLKALVDHAFMEFKAAMREYRRQKWHAMLV
VEENALCVSGPLCXPLSALCARLATASARLAPALSVRLRGCLAENVDGYIFEEVVLESWF
NTGGTMQFTHDVKRNLVPAFAPPNKSASQINYLPKLLESCKLLNMEYDDARCLRAQVKKP
SIAAKETLLNQGIRVIEPPEALRILNQRTDLSDAGAGSVMDLF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagaagataaacaagatattattcagagttttaatattagaattggagatgat
atcaacaacttgggaaatgcttatcaaatagaaaatgaacttgttgcaaggcgcgatgca
ttacagaactctcttcgtgtagtaaatacagaagtgccaacggaaatatcagcatctata
gataaagccaagaaaaactgtagccatacagcagagctcaaagctaaaagtgagatcttg
caagagaaagttgataagttcttgacaaatactgaacccctgcgaaatgagcttagcaaa
agatttgcagccatcaacaaacttgaaaaagtgttgtgctatctgaagtcatatgcagag
gttgatagcctatgttctcagctaagcacatgtactgaagatgaagtaagtgtgcaaatt
tacagtgaactcaagaaattgtgcattcaatatcaagaggggcatagaggcacttacgta
aaggaatacacacactactggcacaatatcctcaaggatagattgactaagcaatatgaa
gatgtccttaagcaattaaaatggccaatggtgactggtgctgataattctccgttgccc
aaagatgtcttggtcaaattttatgggctaaccaaattcctatttctcatagaggagcct
gatgatgagcaggctagaatgctttccggagatttcagcttagaaaatccatgcttacca
gtgaaaatattgctacggccgctaaagaaacgattcacgttccatttcactggacagcgt
cagacggcacgtctcgaccgcccggaatggttccttacacagactctgacgtggatcaag
gatcatcaaggctttgtgaaatcgcatgttcagccacttgccgataaactgaatataaga
catataagagctgtggctgaatttaacgcaggtctaatctcattcgccgctgaacgactc
cacactgtcttaggcctgtataacacccaaggaaccaagcatgagaacatcgccgatacc
gacgcggcgtttgcccacgctgtggatgaggctctgggtttccacagagaattggttctg
atgaccgggcatgaagccaatagcgtgctgtctgtgctgaccaaggctgagatatttgtc
cggtggcttgcggtggagaagaaatatgccctggccaaactagacgagactcttgacaat
gagcaatggagcgagccgatagctggcggcaacggttccgcggtcggcaccgtcatatgg
gttccgcgcggtgccgactggttcatagcgctgttgaaaaccatcgaggatcgatacgcg
gtactaccgcagccgggacatcgcctccaattcctggagcttcaactagagcttgtggaa
gaatggcgggtacggttgacgcagatcatgagcgcagccctgggtgctttggaagcggac
tcgttcctggcgggcggggcgcgggaccccctcagtgctgtcgtcaacgctgcgcactac
tcgcgcgaagtactgctgcaatgggcgcattcactacattacctgcaactacattactac
cggcgtcagttccaacacttcacgcatcagcagcatcaagaagactcagagtcgttgggc
tcggacgacgaaaatgacgacgacaaacgcggcaaagagaaatctgattccgaggatgaa
gctttatcactgaaggatgtggaacaaaaggccaagaatctggcacttgatgagttgacg
cgccgaaattccgcgatgcctgaacttagtcagttcgatatcatgtcaccaacgggcact
agaaacgtaccagagctgacgagtcaagcggcagaagaggctggcgtgtgggctgaagcg
ccgggactgctcgggcggctgcgggacgccggcctcaaagcactagtggatcacgcgttt
atggagttcaaagcggctatgcgcgagtaccgaaggcagaaatggcacgcgatgctggtg
gtggaagaaaacgctctgtgcgtgtcaggtccactttgcncgcctctttccgcgttatgt
gctcgtctcgctaccgcttccgcgaggctggcgccagccttatcagtgagacttagagga
tgcctggctgaaaacgtggacggttacatatttgaggaagtggtgctagaaagctggttc
aacacgggcggcactatgcagttcacgcacgacgtcaaacggaacctcgtgccagcgttc
gcgccgcccaataaaagtgcttctcagatcaactacttgccgaaattactagaatcctgc
aaactactaaacatggaatacgatgacgcgcgttgccttcgtgcgcaggtaaagaaacct
tctatagcggcgaaggagaccctactgaaccagggaatccgcgtgattgaaccgcctgag
gctctaaggatactcaatcagaggacagaccttagtgacgcaggagccgggtctgtaatg
gacttgttctga
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