Choristoneura fumiferana (eastern spruce budworm): 141429017
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Entry
141429017 CDS
T11020
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 3
KO
K22991
WD repeat-containing protein 45
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141429017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141429017
Membrane trafficking [BR:
cfum04131
]
Autophagy
Other autophagy associated proteins
Others
141429017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WDR55
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_IFT122_2nd
BCAS3_WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RSE1_2nd
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_IFT80_2nd
TAF1C_beta-prop
MOSC_N
Motif
Other DBs
NCBI-GeneID:
141429017
NCBI-ProteinID:
XP_073945251
LinkDB
All DBs
Position
6:10616467..10620041
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AA seq
348 aa
AA seq
DB search
MNLSDDNVFGNGLLYVGFNQDQGCFACGTENGFRVFNSDPLKEKERQNFAEGGLSYVEML
FRCNYMALVGGGKTPVYPPNRVIIWDDLKKDSAISLDFNSPVKAVKLRRDRIVVVLENLI
KVYTFTAQPQMLHVFETCQNPRGLCVVCPNSNNAILAYPSRKTGHVQLVELSSHASTSSS
PDGHLITAHEAPLSCLALNVGGTRLATASTKGTLIRVFDTATGQKLAELRRGAHQATIYC
INFNHTSTNLCVTSDHGTVHVFSLEDEKLNKQSSLATVNFLPKYFSSNWSFCKFTIPNGP
PCICAFGVDKSSIVVICADGSYYKYKFNEKGECTRDVYAQFLETSEDR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcagacgataatgtcttcgggaatggcctattatacgtaggattcaaccaa
gatcaaggatgttttgcttgcggtacggagaatggatttcgtgtattcaacagcgatcca
ctcaaggagaaagagcgtcaaaactttgcggagggcggtttgtcttacgtggaaatgctg
tttagatgcaattacatggccttagtcggcgggggcaagacgcccgtctatcctccgaac
agagttataatatgggatgacttgaagaaagactctgcaatatctcttgacttcaatagt
ccagttaaagctgtaaaattgagaagagacagaattgttgttgttttagagaaccttata
aaggtatacacattcacagcgcagcctcagatgcttcatgtgtttgagacatgtcaaaat
ccacggggtctgtgtgttgtttgcccaaacagtaataatgcaatacttgcttatccaagc
cgcaaaacgggtcacgttcaactggttgagttgagcagtcacgccagcactagcagctct
ccagatggacatctaattactgcccatgaggctccactgagctgcttggctctgaatgtg
ggtgggactcgcctggccacggcttcaacaaaaggcaccctcataagggtctttgataca
gccactggacagaaactagcagaattaagacgaggtgctcaccaggcaacaatttactgc
ataaattttaaccacaccagtaccaatttgtgtgtgacatcagaccatggtactgtgcat
gtcttcagcctggaagatgagaagttaaataagcaatctagtttagcaactgtcaacttc
cttccaaagtacttttccagcaactggagtttctgcaagttcactattccaaatgggcca
ccctgtatttgtgcatttggtgtggacaagagctccattgttgttatctgtgctgatggc
tcatattataaatacaaattcaacgaaaaaggtgaatgcacaagagatgtgtatgctcag
tttctagagacatctgaagacaggtaa
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