Choristoneura fumiferana (eastern spruce budworm): 141429045
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Entry
141429045 CDS
T11020
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141429045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfum02000
]
141429045
Transporters [BR:
cfum02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
141429045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_23
SbcC_Walker_B
SRP54
AAA_29
AAA_22
Motif
Other DBs
NCBI-GeneID:
141429045
NCBI-ProteinID:
XP_073945296
LinkDB
All DBs
Position
6:complement(11154891..11198597)
Genome browser
AA seq
1762 aa
AA seq
DB search
MFFLALCGIFCAMRARDGARTTGAGTKFRLLMWKNFLQQWRHRIQTVAEVLLPVATMALV
LILRSEIEPATRDVSTYPVIPAGTLNYSLPVIGGMNVTRLSIAYSPESPVLDDVIRSAVT
TLITRNIRSLISVILELFPEFNFPDFPDLPELPDLPDLPEIPDSINGTIIADIIKKLIRV
HAYNNSESLRSIYSSEEITREVIAAVEFSDDLYGATELTGDLRYSLRFPERPRQNSFYGQ
GGQSWRTDLVFPYFETPGPRFPFSWEGGNDPGYVNEMFIAIQHVVSMELITHLTGESMQE
FSVNVQRFPHPSYIEDFAVEALQFLFPMFIMLSFSYTAVNIVRAVTVEKELQLKETMKIM
GLPTWLHWTAWFCKQFIYLLIIAILIVILVKVNWFTNAEGFSDYAVFTHTPWTVLFFFLL
LYLACTIFFCFMISGLFSKASTAALFSGVIWFVSYIPAMLLAMDVEVSAGVQAFTCLSIN
TAMSYGFQLLLAKESTGGMQWGEFMESPSPDSNRFSFGHVVIMLTLDCVLYMLVALYLEQ
VLPGPYGAPKPWYFLVQKSFWFPNSQVVPVGMDTDNTQDIIMEKDPNDHAIGVKMTNLTK
IYGANVAVNNLSLNIYDDQITVLLGHNGAGKSTTISMLTGNVKVSSGSVWLAGYDVAQQT
AAARAHLGFCPQHNVLFNELTVREHLEFFSRLKGLRGQELKDDIDLLIAKLELEEKRDYE
AAGLSGGQKRRLSVGIALSGSPRVVLLDEPTSGMDPASRRALWDLLQREKSGRSMILTTH
FMDEADILGDRVAIMAGGRLQCVGSPYFLKRHYGVGYTLVVVKRHGFQYEACTEIINKYI
PDITIKEDRGTEITYALTNEQAHLFEAILSDLESNVDNVKFQNYGLTATTLEDVFMSVGS
DVAPVHSESDDATTSAGSLISDDLQKPDFDVSSIDILDKDNATLSGPRLWVQHVLAMWLK
LWLVWKRSWMLLLLQVLVPVFQINATLGILQWVMSVSETVVPRALTLRQGYSETETVLTY
NGTGSSTSLGALAMAAYQYMFDSANIDTMKLTVVESQPIDDYYLDRTTDPAQMGVLRHRM
LTGASFAAESATAWFSNFGYHDVATSLAAVHEALLKARSPQANLSVYNYPLQANYRDQSN
MQAVVTMLSMQLSSGIGNSLGIVSAVFIMFYIKERVSRANLLQKAAGIQPVIMWGSAALF
DWAWFLIICIFIVISCAAFSVIGLSSFAELGRMYLALMVYGFAMLPFHYLMSHVFKGPAL
GFVVMFFVNVLFGMMGAQIVEALSAPQLDTQHVADIMDAILQFFPLYSLVRAVSALNMVG
LTEWSCMQACDYLSAVLPNINECSMEIMCNNNFPSCCVRENAYFDWEEPGIMRYMTCMLV
SGGVLWALLMFIEYRVYQKIFNRTKAPPPLIHETLDADVFDEMVHVERVDQASLAEHSLV
AKGLSKYYGKHLAVNQVSFTVSDAEVFGLLGVNGAGKTTTFKMLMGDETVSSGDAFVSGY
SVKRDITKVHENIGYCPQFDAVFGELTGRETLQLFSLLRGLRGEHAAARADMLAHALGFT
KHLDKRVEQYSGGNKRKLSTAVALLGHTRLVFVDEPTTGVDPAAKRQVWRAVRGARRAGR
GVVLTSHSMEECEALCSRLTIMVNGQFQCLGTPQHLKTKFSEGFTLTIKMKMDEECRNSA
PGGRDIAAVKQYVESNFTTPKLMEEYQGLLTYYLPDRRVAWSNMFGTMERCRQNYDVEDY
TISQTTLEQIFLQFTKYQREGL
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgttttttttggcattatgcggaatattctgcgcgatgagggcgcgtgatggggcgagg
acaactggcgctggcaccaaattccgactgctgatgtggaagaacttcctgcagcaatgg
cggcaccgcatccagaccgtcgccgaagtgcttctgcccgtcgcgacaatggctctggtg
ctcatcctccgctcagagattgaaccagccacgcgagacgtgtccacctacccagtgatc
ccagcaggcacactcaattactcgttacctgtcataggagggatgaacgtgactcggctt
tcaatagcatattcacctgaaagtccagtcttggacgatgtgatacgaagcgcagttact
actttaattacgagaaatataagaagccttatatcagtaatcttggagctattcccagag
tttaattttcccgactttcctgatttgccagagttaccagaccttccagatcttcccgag
atacctgattcaataaatgggacaattattgcagatataattaaaaaacttataagagta
catgcttataataatagtgaaagtttaagaagtatttattcctcagaagaaattactaga
gaagttatagctgctgtagaatttagtgatgatctttacggtgccacggaattgacgggc
gatttaaggtattcattgagatttcctgaaagaccgagacagaattcgttttacggtcag
ggagggcaatcgtggcgaacagatttagtatttccgtatttcgagactcctggacctaga
tttcctttctcatgggaaggtggcaatgaccctgggtacgtcaatgaaatgttcatagca
atacagcatgtggtatctatggaacttattacgcaccttactggcgaaagtatgcaagag
tttagtgtcaacgtgcaaagatttccacatccgtcgtacatagaagatttcgcggtagaa
gctctgcagttcttgtttcccatgttcataatgcttagcttcagctacaccgccgttaat
attgttcgagctgttactgtcgaaaaagaattacaacttaaggaaacaatgaaaataatg
ggtttaccgacgtggcttcattggacagcgtggttctgcaaacagttcatatatcttctg
attatagcaattctcatcgttattctcgtaaaggtgaactggttcaccaatgcagaaggc
tttagtgactacgctgtcttcacccacaccccctggacagtgcttttcttcttcctgctt
ctgtacttagcgtgtacaatattcttctgtttcatgatcagcggcttattctctaaagcg
agcacggcggctctgttctctggcgtgatctggttcgtgtcgtacatcccggcgatgctg
ctggcgatggacgtggaagtgtccgccggcgtgcaagcgtttacctgcctcagcatcaac
accgccatgtcctacggtttccagctgctgctcgccaaggagagtaccggaggtatgcaa
tggggcgagttcatggagtcaccatctccggactcgaaccgcttctcgtttgggcacgta
gtgataatgctgacgttggactgcgtgctttatatgctggtggcgctatatttggagcag
gtgctgccggggccgtacggagcgcccaagccctggtacttcttagtgcagaagagcttc
tggttcccgaatagtcaagttgtaccagtggggatggacaccgacaatactcaagatatt
ataatggagaaggatcccaacgatcacgcaattggagtgaaaatgacgaatctaactaaa
atatacggggcaaatgtagctgtcaataatttgtctctgaacatttatgatgatcaaatt
actgtcttgcttggacacaatggtgccgggaaatccacaacgatatccatgctcacaggt
aacgtaaaggtgagcagcgggtcggtgtggctggcgggttacgacgtggcgcagcagacg
gcggcggcgcgcgcgcacctcggcttctgcccgcagcacaacgtgctgttcaacgagctc
acagtgcgggaacacctcgagttcttctcccggctcaagggtctacgcggccaggagttg
aaggatgacatcgacctgctgatcgccaagttggagcttgaggaaaagcgtgactatgaa
gcggctggtctgtcgggtgggcagaagcggcggctgtcggtgggcatcgcgctgagcggg
tcgccgcgcgtggtgctgctggacgagcccacctccggcatggaccccgcctcgcgccgc
gcgctctgggacctgttgcagcgggagaagtcgggtcgttccatgatcctcacgacgcac
ttcatggacgaggcggacatcctcggcgaccgcgtggccatcatggccggcgggcggctg
cagtgcgtcggctcgccctacttcctcaagcggcactacggcgtcggctatacgctcgtc
gtggtcaaaagacatggtttccaatacgaggcttgcactgagatcatcaataaatacatc
cccgacataacgattaaagaggatcgtggtactgaaataacatacgcgctgactaatgag
caggctcatttgtttgaagcgattttgagcgatctggagagcaacgtagataacgttaag
tttcaaaactatggtttaacggcaacgacacttgaagatgttttcatgtccgtgggttca
gacgtggcgcctgtacactcggaatcagatgacgcgactacttccgcggggtccttgata
agcgatgatctgcagaagcctgactttgatgtgtcttctattgatatattggataaagac
aatgcgacattgagcgggccgaggctgtgggtgcaacatgtactggcaatgtggctgaag
ctgtggctggtgtggaagcgctcatggatgctgcttctgctgcaggtgttagtgcctgtg
tttcagatcaacgccacgctcggtattctgcaatgggtcatgtctgtttcggagaccgtc
gtgccgcgtgccctgacactcagacagggctactcggaaacagaaacagtgctaacctac
aatggtacaggctcatcgacttcgctcggggctcttgcgatggcagcttaccaatatatg
tttgactctgccaatattgataccatgaaactcacggtagtggagagtcaaccgattgat
gactattatctagacaggacaaccgaccccgctcaaatgggagtgcttcgccatcgtatg
ctgacgggtgcctcgttcgctgcggagagcgcgaccgcgtggttcagcaacttcggctac
cacgacgtggccacctcgctcgccgccgtgcacgaggcactgctcaaggcgcgcagtcct
caggccaacctcagcgtgtataactatccgctccaagccaactacagggatcagagcaac
atgcaagcggtagtaaccatgctatcgatgcaactgtcctccggaatcggaaacagtctt
ggaatcgtcagtgcagttttcatcatgttctacatcaaagaacgtgtatcgagagccaat
cttctgcaaaaggcggccggcattcaacctgtgatcatgtggggcagcgcggcattattt
gattgggcgtggttcctgatcatttgcatattcatcgttatatcctgcgctgcctttagc
gtcatcggccttagttcgtttgctgaattaggtcggatgtaccttgcccttatggtgtac
ggcttcgccatgctgcctttccactacctcatgtcgcatgtttttaagggaccggcgctc
ggattcgtcgtcatgttcttcgtcaatgttctatttggtatgatgggtgcgcaaatagtg
gaggcgctgtcagctccgcagttggacacgcagcacgtagccgacattatggatgccatc
ctgcaattctttccactttacagcctcgtcagagcagttagtgcattaaatatggtcgga
ctgaccgagtggtcgtgcatgcaggcttgcgactacctgtccgcagtgctgcctaatatc
aacgagtgcagcatggaaatcatgtgcaacaacaacttcccttcctgttgtgttcgcgag
aacgcgtattttgactgggaagagccgggtattatgcgatacatgacgtgcatgttagtc
agcggaggggttctgtgggctctacttatgttcatcgagtacagggtctatcagaagata
ttcaaccgcacgaaggcaccgccaccattgatccacgagacgctggatgccgatgtattc
gatgaaatggtgcacgttgaacgagtggaccaagcctcgctcgcggagcacagcctcgtc
gccaaaggattgtccaagtattacgggaaacacttagccgtcaaccaggtttcattcact
gtttctgatgctgaagtgttcggtctgctgggagtgaacggcgccggcaaaacaacgacg
tttaagatgttgatgggcgacgagacggtctccagcggcgacgccttcgtcagcggatac
tccgtcaaacgggacatcactaaagtgcatgagaatataggttactgcccgcagtttgac
gcggttttcggtgaattgacggggcgcgagacgctgcagctgttctcgctgctgcggggg
ctgcgcggcgagcacgcggcggcgcgcgccgacatgctcgcgcacgcgctcggcttcacc
aagcacctggataagcgggtggagcagtactcgggcggcaacaaacgcaagttgagcacg
gcggtggcgctgctgggacacacgcggctggtgttcgtggacgagcccacgacgggcgtg
gacccggcggccaagcggcaggtgtggcgcgcggtgcgcggcgcccggcgcgccggccgc
ggcgtggtgctcacctcacacagcatggaggagtgcgaggcgctctgctccaggctcacc
atcatggtcaacggacagttccaatgcctcggcacgccacaacatcttaagaccaagttc
tccgagggtttcactttgaccatcaaaatgaagatggatgaagaatgcagaaattccgcg
ccaggcggtcgtgatatcgccgcagtcaaacaatatgtagaatccaatttcaccacacca
aagttgatggaggagtaccaaggcttgctcacgtactatttgccagaccggagagttgct
tggtccaatatgtttggaactatggaacgctgtcggcagaactacgacgtagaggactac
actatctctcaaacaaccctcgagcaaatcttcctgcaatttacaaagtaccaaagggaa
ggtctatag
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