Choristoneura fumiferana (eastern spruce budworm): 141429064
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Entry
141429064 CDS
T11020
Name
(RefSeq) sodium-dependent nutrient amino acid transporter 1-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
141429064
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfum02000
]
141429064
Transporters [BR:
cfum02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
141429064
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
141429064
NCBI-ProteinID:
XP_073945333
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Position
6:complement(11470770..11489483)
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AA seq
667 aa
AA seq
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MEKSQETVAENGQTNVAFDTAPETTIDAPPPESTSANGHSSAIEPTVTIVDNGPEEKKFA
PPFPEKVDLVTDEPRKKGEDRRENRPKWDNQIEFLFSCIAMSVGLGNVWRFPFVAYNNGG
GAFLIPYLIVLAVIGMPMYFLETVLGQFSSSNCVRVWALSPAMKGTGYAQALGAGYVLSY
YVSIIALCLYYLAMSFQSTLPWAICQPEWENCVPSGETVNGTELDGDAVSSAELYFTQTV
LRQLDGIEDGIGTPLWDLTLCLLASWIIIFVIVARGVKSSGKAAYFLAIFPYIVLFILLI
RAVTLPGAGNGIAFFFTPEWEKILTLEVWYAAVTQVFFSLSVCSGALIMFASYNSFTQNV
YRDSIIVSILDTCTSMISGITIFGILGNLAYELNYDNIEDVIGSGGTGLAFISYPDAIAK
SPFAPQLFSVLFFLMMAVLGVGSGVGLLSTINTVLLDAFPRVPTIYMATCACISGFLVGL
VYVTPGGQYILEIVDYYGGTFMRLFAAIIETIGIFWIYGLENLCLDIEFMLGVKPNFYWR
ICWSIITPFIMIAVFMYAMIATDALVFGDDYVYPREAYIAGNMLQYIGMALIPIFIGIAI
WKRRSSSFVETIKRAFGKKPTYGPQEEEKREQWRQFRSEAKYDRELHTKNWFHHIFLSLF
GGHRKKN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagccaagagaccgtggccgagaatggtcaaactaatgtagcctttgacact
gcgccagagaccaccatcgatgcaccaccaccagaatcgaccagtgcaaacggacacagc
tcagctatagaaccaacagtaacaatagtagacaatggcccggaagagaaaaagtttgca
ccaccgtttccagaaaaagtcgatcttgtgacagatgaaccaaggaaaaagggcgaagat
agaagagaaaaccgtccaaaatgggacaaccagatcgaattccttttttcttgtatcgcc
atgtcagtggggctcggcaatgtgtggcgattccccttcgtagcatataataatggtggc
ggcgcattcctcatcccctacctgatagtattggcagttataggaatgcctatgtacttc
ctggagacagttcttggacagttcagcagcagtaactgtgtgagggtatgggctctctca
ccggctatgaaaggtactggctacgcgcaagctcttggcgcaggctatgtgctttcttac
tacgtctccatcatcgccttgtgcctctactacttagcgatgagtttccaatccacactg
ccgtgggctatctgccaaccggaatgggagaactgcgtgccgtccggcgaaaccgtaaac
ggcacagagctagatggagacgcagtcagcagcgcggagttgtatttcactcaaacggtt
cttcggcaactagatggcattgaagatggtatcggaactccactatgggacttaacactt
tgtcttctggcctcatggataatcattttcgtgattgtggcccgcggcgtgaagagctca
ggcaaagctgcttatttcctggctattttcccgtatattgttttgtttattttgctcatc
agggcagtgactctaccaggcgccggcaatggcattgctttcttctttaccccagaatgg
gagaagattttaacattagaggtctggtatgcagcagtcacacaagtattcttctcactc
tcagtgtgttctggtgctcttattatgtttgcttcatacaacagttttactcagaacgtt
tacagggactccatcatcgtttctattctggatacgtgcacgagtatgatatcaggaatt
acaatctttggtatcctcggaaatctggcatacgaactgaactacgacaacattgaggac
gtcataggatcaggaggaacggggcttgccttcatctcttaccccgatgccatagccaag
tctcccttcgcaccacagctattctcggttctatttttcctgatgatggcggtgcttggt
gtcggatccggcgtggggctgctctctacgataaacacagtactcctcgacgcgttcccc
cgtgtgcccaccatttacatggccacttgcgcctgcatatctggatttctcgttggacta
gtttacgttacgccgggtggacagtacattctggagatagtagattattacggaggaact
tttatgagactcttcgcagcaattatcgaaaccatcggcatcttctggatttatggatta
gaaaacctttgcctggatattgagttcatgttaggagtcaagccaaacttctattggcgt
atctgctggtctataatcactccctttataatgattgctgtcttcatgtacgcaatgatt
gcgactgacgcccttgtgttcggagacgattacgtctatccgagagaagcttacattgcg
ggtaacatgctgcagtatattggaatggcgcttattcccatattcattgggattgcaatt
tggaagcgtagatcttctagctttgttgagactataaagcgtgcgttcgggaaaaaacca
acatatggtccacaagaagaagaaaaacgcgagcagtggcgccagttccggagcgaagcg
aagtacgacagagagctgcacaccaaaaattggttccaccacatcttcctcagtcttttc
ggagggcatcgaaagaagaattaa
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