Choristoneura fumiferana (eastern spruce budworm): 141429124
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Entry
141429124 CDS
T11020
Symbol
stet
Name
(RefSeq) rhomboid serine protease stem cell tumor isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cfum01002
]
141429124 (stet)
Enzymes [BR:
cfum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
141429124 (stet)
Peptidases and inhibitors [BR:
cfum01002
]
Serine peptidases
Family S54: Rhomboid family
141429124 (stet)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
141429124
NCBI-ProteinID:
XP_073945443
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All DBs
Position
6:13864428..14010702
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AA seq
461 aa
AA seq
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MSVWVGSGRGGSTGMLAPPVTTAPLLSTNTSMESGIEAGVLPTVTGSLASARDSLGSVSR
AAEPLYDTDHTDLGSELDEAEIRRELMHDKWRLLFDRFDPEGFGEIPWPDFIQTLQNPDF
KAQVPPHKQEILLDKAQNATSDSITFQEFVNVMSGKRTRSYRCAVHHRDREVSSENDFRL
LLEDPTFFARMVHLVAMEVLPEERERKYYQERYTCCPPPLFIICVTLLELGVFAWYAWGA
GGVAAAAGPVPVDSPLVYRPDRRRELWRFLTYSVVHAGWLHLAFNLLVQLAVGLPLEMVH
GALRCGAVYLAGVLGGSLAASVLDPDVCLAGASGGVYALLAAHLANALLNFHAMRYGAVR
LVAALAVASCDVGFAVHARYTKQEAPPVSYAAHVAGALAGLTIGLLVLKHAQQRLWERLL
WWAALGAYAACTLFAVLYNIFSGPVDELHYMPPDPPPDAGF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgtgggtgggaagcggccggggcggcagcacgggcatgcttgccccgccggtc
accacggcccctcttctctccaccaacacctcgatggagtccgggattgaggctggagtc
ctgccgacggtcacggggtcgctcgcgtctgcccgcgactcgctgggctctgtgtcccgg
gcggcagaaccactgtatgacacggatcacacggaccttggatctgagttggatgaggcg
gagatcagacgggagttgatgcatgacaaatggcggttactttttgataggttcgaccct
gaaggttttggcgagataccgtggccagatttcatacagactctacagaaccctgacttc
aaggcacaagtaccgccccacaaacaagaaatccttttggataaagcacagaatgcaacc
agcgactctataacatttcaggagttcgtcaacgtgatgagcgggaagcgcacgcgcagc
tatagatgcgccgtgcaccatcgcgaccgcgaggtcagctccgaaaacgactttcggcta
ctgctcgaagaccccaccttttttgccaggatggtgcacttagttgctatggaggtgctc
ccggaggagcgggagcgaaaatactaccaggaacgatacacatgctgtccaccgccatta
tttatcatctgcgtaactctactcgagctgggcgtgttcgcgtggtacgcatggggcgcg
ggcggcgtggcggcggcggcaggcccggtgccggtggactcgccgctggtctaccggccc
gaccgccgacgcgagctgtggcgcttcctcacatacagcgtcgtgcacgccggctggctg
catctcgcgttcaacctgctagtccaattggcggtgggcctacctctcgagatggtgcac
ggggcgttgcgctgcggcgccgtttacctggcgggggttctggggggttccctggcagcc
tcagtgctggaccccgacgtgtgcctggcaggggcttcgggcggcgtctacgcgttgctg
gcggcgcatttggccaatgcgttgctgaacttccacgcgatgagatacggggcggtgcgg
ttggtcgcagcgctggctgtcgcgtcgtgtgacgtcggattcgccgtccacgctaggtat
actaagcaggaagcgcctccggtgtcgtacgcagcgcacgtcgcgggcgcgctcgctggc
ctcacaataggtctgctagtactgaagcacgctcaacaacggctctgggaacgcctgctc
tggtgggcagctctaggggcctacgctgcatgcacgctctttgcggtactatacaatatc
ttcagtggccccgtcgacgaactgcattatatgccgcccgaccctccgcccgatgctggc
ttctga
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