Choristoneura fumiferana (eastern spruce budworm): 141429148
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Entry
141429148 CDS
T11020
Name
(RefSeq) uncharacterized protein isoform X1
KO
K19192
histone deacetylase complex subunit SAP130
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfum03036
]
141429148
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
141429148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP130_C
Motif
Other DBs
NCBI-GeneID:
141429148
NCBI-ProteinID:
XP_073945487
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All DBs
Position
6:complement(14387205..14399809)
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AA seq
681 aa
AA seq
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MSNNLENERTITPGKMYPIDLAPQKITIVKSVSNSDVKMTHLITSQPKTTGAGQIITHAG
SMGLIRPATQILAPGVGSQQQMIVSGSPILQGTQIVSQGSQLLGQSSQIITPSQLLGTGQ
ILQPATQIISQGTQLSVQVSSSCPNVQVSAASPVTGAQVLNVGGLGGQLVSGSGNLVVSS
SVRTLPPSVRVLPPLPHHNTRPVLSSVNAGGGVLVNKPASHVPRGLAAGASLALRPAAPS
TSQTGQAWAGAPRGVRGALVYNTRAGAPRAARPPAPPPATAPGLAVSLPNTTVLASSLSS
GVITGAVRGPAPRPAAPAPAASRPLPLLQRNYQPAKVVGVNASPVRPPVGNSAPPQLYYE
VPRAAHPRLAPHYSAPAPAPAPVSAPASAPAQSQPATIMNVVSAVQTLSEIRGAAAAAAP
LTLAAMAGARPSILRKRDSEGSPTKPALGYARGWEDVGAGSGGSTTVSASSSPAPDDEPE
PPPQPDLSPRKKPRKQMLSNNDVRQCEFPAEDAPPTPPPVTVNPPPKRPLLSSSYVCGWR
ATALHFARPADVRRREPRAKDILALASQRHVRAAADGWKVHHLTAQMDDLVTLEADVGDQ
LAGVLRALENVSGRAHAALKPHSHALLELLKGNIQRSKIVCEGIQEAREDILRVFTHRNF
VSDILTRQADKRSFRKHRSQS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataatttagagaatgaaagaacaatcactcctggcaaaatgtatccgattgat
ttggcaccacaaaaaatcactattgttaaaagtgtgtccaactctgatgtgaaaatgact
cacttaatcactagccagccaaagacaacaggtgcaggtcaaataattacccacgctggg
tcaatgggcttgattcgtcccgccactcaaattctggctcctggcgtcggttcacagcaa
cagatgatagtcagtgggtctccgattctccaaggcacacagattgttagtcaaggctct
cagctgcttggacagagctcgcaaatcataactccatctcagttgctggggacaggacag
atcttgcagcccgcaactcagatcatcagtcaaggcacgcagctctccgtgcaagtgtcc
agctcctgccctaatgtgcaagttagtgcggcgtcaccagttactggagcgcaggtgtta
aatgtgggaggacttggagggcagcttgtgagtggatctggcaaccttgtcgtgagctca
tcagtgcgcaccttgcctccaagtgtgagggtactgccacctctgcctcaccataacact
cgaccagttctgtcgagtgtgaacgcgggcggcggcgtgctcgtgaacaagccagccagc
cacgtgccgcgcgggctcgccgccggcgcttcgctcgcgctgcgccccgccgcgccctcc
acctcgcaaactggacaagcatgggcgggggcccctcgcggcgtgcgcggcgccctggtg
tacaacacgcgcgccggggcgccccgcgcggcgcgcccgccggcgccgccgccggccacg
gcccccggactcgcggtctcgctgcccaacacgacagtgctcgcctcgagcctgtcgagc
ggcgtgatcaccggcgcggtgcggggccccgccccccgccccgccgcgcccgcgcctgcc
gcgtcgcgccccctgccgctgttacagagaaactaccagcctgctaaggtggtaggagtg
aacgcctctccggtgcgtccgccggtaggcaacagcgcgcctccgcagttgtactacgag
gtgcctcgcgccgcgcacccgagactcgcgccccactactccgcgcccgcgcccgccccc
gcgcccgtatccgctcccgcttcggcgcctgctcagtcgcaacccgctactatcatgaac
gtggttagcgcagtccagactctgtcagagatacgcggcgcggcggcggcggcggcgccg
ctcacactcgccgctatggccggcgctagaccttctatactgagaaaacgagattctgaa
gggtcaccgacaaagccagctctggggtacgcgcgcggctgggaggacgtgggcgcgggc
tcggggggctccacgaccgtgtcggcctcctcgtcacccgcgcccgacgacgagcccgag
ccgccgccgcagcccgacctcagcccgcgcaaaaagccacgcaaacagatgctaagcaat
aacgatgtgaggcaatgcgagttcccggcggaggacgctccgcccactccgcctccagtc
actgtgaatccaccgccaaaacgtcccttgcttagttcgagttacgtgtgcggctggcgc
gccaccgccctgcactttgcgcgtccggcggacgtgcggcgccgcgagccccgcgctaag
gacatcctcgcgctcgcgagtcagaggcacgtgcgggccgccgccgacggctggaaggtg
catcatctcaccgcgcagatggacgacctggtgacactagaagcagacgtgggtgaccag
ttggcaggagtgttgcgcgcgttggaaaacgtttctggccgcgcccacgccgcgctcaaa
ccgcactcgcacgctttgttggaactccttaagggaaacattcaaagaagtaagatagtg
tgtgaaggcatccaggaggctcgtgaagacattctccgcgtgttcacgcacagaaacttc
gtgtccgacatcctgacgcgacaagctgacaagcgcagctttaggaaacacagatcgcaa
tcataa
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