Choristoneura fumiferana (eastern spruce budworm): 141429224
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Entry
141429224 CDS
T11020
Symbol
Sce
Name
(RefSeq) E3 ubiquitin-protein ligase Sce
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
141429224 (Sce)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfum04121
]
141429224 (Sce)
03036 Chromosome and associated proteins [BR:
cfum03036
]
141429224 (Sce)
Enzymes [BR:
cfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141429224 (Sce)
Ubiquitin system [BR:
cfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141429224 (Sce)
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
141429224 (Sce)
Noncanonical PRC1 (PRC1.1)
141429224 (Sce)
Noncanonical PRC1 (PRC1.3/1.5)
141429224 (Sce)
Noncanonical PRC1 (PRC1.6)
141429224 (Sce)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-Nse
zf-RING_5
zf-RING_4
zf-RING_6
RING_XB3-XBAT31
zf-rbx1
zf-UDP
zf-C3HC4_5
Sina_RING
SRP-alpha_N
Motif
Other DBs
NCBI-GeneID:
141429224
NCBI-ProteinID:
XP_073945598
LinkDB
All DBs
Position
6:complement(17214887..17224832)
Genome browser
AA seq
377 aa
AA seq
DB search
MSSTEPSQNKTWELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTK
ECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQE
RVLAKLNMSHSQASLVNSITEGIKLQSQNRPQRSRKTVDDNSNPSNSNGTVEVPQNGSSS
SAPKDSTSSTGNPTPSGQSTSNPASVRSTPSPVPSNLSSISKNTSITKRAKSVLTSERSE
ESESSDGRTEGENSMDTEGEGEPLNPNEIELVFKPHPTEMTGDNQLMRALRDSSVRYIKT
TANASVDHLSKYLAMRLTLDLDAELPEAYRLLNFCIYVAPAPGQFVPLAGSQTLRQINDK
FWKVNKPLEMYYSWKKT
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacggagccctcacagaataaaacatgggaattatccctttacgagctgcat
cggacgccgcaagaggtgataacggatgccaccgaaatcgcggtgtccccgcgaagcttg
cacagcgaattgatgtgtccgatttgtttggatatgctcaaaaagacgatgacgacgaag
gagtgtctccacaggttctgttcggactgcattattactgctttgcgctcagggaacaaa
gaatgtccgacttgtcgaaagaagttagtctcgaaacgatctcttagacctgaccctaac
ttcgacttgctaatatcgaagatatatcccagccgagacgagtatgaggctcatcaggag
cgcgtgttggctaaattgaacatgtctcactcacaggcatccctagtgaactctattacg
gaaggcataaagttgcagtctcaaaataggcctcagaggtcgcggaaaaccgtggacgat
aacagcaacccgtctaattcaaacggcacagttgaagttcctcaaaatggtagcagttcc
tcagctcctaaggacagtacttcttcaactggcaacccaactccatctggccaatctact
tctaacccagcatctgttagaagtacgccgtccccggtcccatcgaatttaagctccata
tcaaaaaacacaagcatcactaaaagggctaagtctgttttaacttcggaacgcagtgag
gagagtgaatctagtgatgggaggactgaaggtgagaactccatggacaccgaaggcgag
ggtgagcccctgaatccgaatgagattgaactggtctttaaaccacatcccacagagatg
actggggacaaccagctgatgcgggccctacgagacagctctgtcagatatattaaaacc
acagctaatgcttcagttgatcacctgagcaagtacttggcaatgcgacttacgctggac
ctggatgctgagctgcctgaagcttaccgtcttcttaacttctgcatctatgtggctccc
gcaccaggacagtttgtacctctagctggctcacagaccctcaggcagatcaatgataaa
ttctggaaggtgaacaaaccattagagatgtactactcttggaagaaaacctag
DBGET
integrated database retrieval system
