Choristoneura fumiferana (eastern spruce budworm): 141429310
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Entry
141429310 CDS
T11020
Name
(RefSeq) LOW QUALITY PROTEIN: prominin-like protein
KO
K06532
prominin 1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfum04147
]
141429310
04090 CD molecules [BR:
cfum04090
]
141429310
Exosome [BR:
cfum04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
141429310
CD molecules [BR:
cfum04090
]
Proteins
141429310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
141429310
NCBI-ProteinID:
XP_073945708
LinkDB
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Position
6:complement(21704661..21780667)
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AA seq
935 aa
AA seq
DB search
MWRTCLALAALAGTGWAGAPAGESFLTNISRTLHSEMADVLQMAHVEYSTPVINVTYVAT
VEFDMRAMGPLYNHTGLVIDVIAKKQAYPEGIVSVSDGNLEFASARENWRVLLAHYAGPA
ALLVVAALLAPALPLAGLFWCCCYWCRAGRRRRPFDRKYDACLKGLLAILLIALLTLFLF
GVVCAFATDEQLERSTSEAPGALRAGLRDARTFLNATQAHMRWLLVVNYNELERKLDALL
TSSGLTVSVHLGEFSRAVSVTTLNKMVQQLDAVQADLRTVHNVTSVLRYNAERLNTGLRK
VKAQLLQTLAKCEQPQCLRLQEKYKIGQLDTEIQYSQMPDVSELLSNVTALLDSNIKAEV
AEGQQVFASIQREIQRSVDQHIPAVKQAVAATGRRLAAVADEITAQAGNASKKLQEQEAA
ADTLQEWHAQYGPYRRHATRAAAAALLLITCLMTWGLVCGVCGKRPDVYGASDCCNKGAG
SRCLLCGMGVMFIVGGISAVVLVVYFVVGVASQRFICDPLTEPQGNRLFDDLEKMVDLER
AMFNERRDPDFNMSRVLTYCHRNHSLMETLELDRLYDLEGLRTSVAEEVSRRAAALRPAF
PASRPLSILKPRAREKLEKLAQTGLSDFDFDRILHALETNMTNLSLDSLSAQLEATAGSL
VSRAGFARVSMELRDAAAMLTAYHADIVTPMLDHTRKLNITAMNLRDGLRFNHSSFNDAI
RYLIHETSQAEVFLNTQGPDLIQSLTQDFASVVAQMLDSYLQLVISAARHDVGRCGPLSN
AFNATRDAACHKMLMPTNGYWMAVSWCLVLFVPLLVVAARLARLYLHVDAYPGPLVEAEY
LYDAFADRDNVPLANAYKAEKRAGREGRRGGGAGRGGARDEARAPVVAPPLDAHHARRYN
DMAPKHWEEGPPRYHGPTEYERPPPYYYPGPNDRQ
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggacttgcctggcgctggcggcgctggcggggacgggctgggccggcgcgccg
gcgggggagtcgttcctgaccaacatcagccgcacgctccactccgagatggcagacgtg
ctgcagatggctcacgtggagtattccacgcctgtgatcaacgtcacgtacgtggcgacc
gtggagttcgatatgcgggccatgggaccgctctacaaccacaccgggctcgtcatcgac
gtcatcgctaagaagcaggcctaccctgaagggatagtttcggtgtcggacggcaacttg
gagttcgcaagcgcgcgcgagaactggcgcgtgctgctggcgcactacgcggggcccgcg
gcgctgctcgtggtggccgcgctgctggcacccgcgctgccgctcgctgggttattctgg
tgctgctgctactggtgccgcgcggggcgacggcggcgccccttcgaccgcaaatacgac
gcctgcctgaaggggttgctcgccatcctgctcatagcgctgcttacgctcttcctgttc
ggcgtggtatgcgcgttcgcgacggatgaacaattggagcgcagcacgagcgaggcgccg
ggcgcgctgcgggccgggctgcgcgacgcgcgcaccttcctcaacgccacgcaggcgcac
atgcgctggctgctcgtcgtcaactacaacgagctggagcggaaactggacgcgctgctc
accagcagcgggctgacggtgtcggtgcacctgggcgagttctcgcgcgccgtgtcggtc
accacgctcaacaagatggtgcagcagctggacgccgtgcaggccgacctgcgcaccgtg
cacaacgtgacctccgtgctgcggtacaacgcggagcggctcaacaccggactccgcaag
gttaaggcgcagctgctgcaaacactggccaagtgcgagcagccccaatgcctgcgactg
caggagaagtataagataggacagctcgacacagagatacagtacagccagatgccggac
gtgtcggagctgctgagcaacgtgacggcgctgctggacagcaacatcaaggcagaggtg
gccgaggggcagcaggtattcgccagcatacagcgagagatacagcgctcggtcgaccag
cacatccccgccgtcaagcaggccgtcgccgccaccgggcggcgcttggccgcagtagcc
gatgagatcacggcgcaggcgggcaatgcgagcaagaagctccaggagcaggaggcggcc
gctgacacgctgcaggagtggcacgcgcagtacgggccctaccgccgccacgccacgcgc
gccgctgccgccgcgctgctgctgataacgtgtctgatgacgtggggtctggtgtgcggc
gtgtgcggcaagcggcccgacgtgtacggcgctagcgactgctgcaacaagggcgccggc
tcgcgctgcttgctctgcggaatgggagtgatgttcattgtgggaggcatctccgcggtg
gtgctggtggtttacttcgtcgtgggcgtcgcctcgcaacgtttcatctgcgatccactc
accgagccgcaagggaaccgtctgttcgatgatttggagaaaatggtcgacctggagcga
gcgatgttcaacgagcgtcgcgaccccgacttcaacatgtcgcgagtactgacctactgc
cacaggaatcattcgctcatggagacgctagagctggaccgtctctacgacctggagggg
ctgcgtacgtcagtggccgaggaggtgtcccgtcgcgcggcggcgctgcggccggccttc
cccgcatcgcgcccgctcagcatcctcaagccgcgcgcaagggagaagctggagaagttg
gcgcagaccgggctctccgacttcgacttcgaccggatcctgcatgccctggaaacaaac
atgacgaacctgtcgctggacagcctgtcggcgcagctggaggcgacggcgggctcgctg
gtgtcgcgggccggcttcgcgcgcgtgtccatggagctgcgcgacgccgccgccatgctc
accgcctaccacgcagacatcgtcacgcccatgctcgaccacacgcgcaagcttaatata
acggcgatgaacctgcgcgacggcctgcgcttcaaccactcttcgttcaatgacgctatc
cgctacctcatccacgagacttcgcaagctgaagtgttcctcaacacgcaggggcccgat
ctcatacagagcttgacgcaggacttcgcgagcgtggtggcgcagatgctggactcgtac
ttgcagctggtgatctctgcggcgcggcacgacgtgggccgctgcgggccgctctccaac
gcgttcaacgccacgcgcgacgccgcctgtcacaagatgctcatgcccacgaacgggtac
tggatggcggtgtcgtggtgcctggtgctgttcgtgccgctgctggtggtggcggcgcgg
ctggcgcgcctctaccttcacgtcgacgcctaccccggcccgctcgtcgaggccgagtat
ttgtatgacgcgttcgcggaccgcgataacgtacccctcgccaacgcctacaaggcagag
aagcgcgccgggcgcgaggggcggcgcgggggcggcgcggggcgggggggcgcgcgggac
gaggcgcgcgcgcccgttgtggcgccgcccctcgacgcacaccacgcgcgcagatataat
gatatggcgccaaagcactgggaagaaggcccgccccgctaccacggacctactgagtac
gagcggcccccaccctactactatcccggaccaaatgatagacagtaa
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