Choristoneura fumiferana (eastern spruce budworm): 141429676
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Entry
141429676 CDS
T11020
Symbol
Ykt6
Name
(RefSeq) YKT6 v-SNARE homolog
KO
K08516
synaptobrevin homolog YKT6
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04130
SNARE interactions in vesicular transport
cfum04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
141429676 (Ykt6)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141429676 (Ykt6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141429676 (Ykt6)
Membrane trafficking [BR:
cfum04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
141429676 (Ykt6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
141429676
NCBI-ProteinID:
XP_073946208
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All DBs
Position
7:9298096..9299285
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AA seq
198 aa
AA seq
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MVKVYGLLVLYKGVNSATILKAAYDLSSFSYFQKGSVQEFMSFVSKTMVERTQLAARQSV
KEGEYMLQVYVRADNLAGILISDHEYPSRVAHTLITKILDEFSAKVPANSWPTANETTVD
FPVLPQYLVKYQNPREADALTKIQEDLDETKIILHDTIKAVLERGEKLDDLVAKSDSLSY
HSKAFYKTAKKTNSCCSF
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagtatatgggcttctagttctgtacaaaggagtcaacagtgccactattctc
aaggctgcctatgatctgtccagtttcagttactttcaaaaaggctcagttcaagagttt
atgtcatttgtgagtaaaacaatggtagaaagaacgcagctggctgctaggcagtccgtc
aaggaaggagagtatatgctacaagtgtatgtcagagcagacaaccttgcaggtattctt
atctcggatcatgagtatcccagcagggttgcacacacattaatcactaagatcctggat
gagttctcagcaaaagtgccagccaattcatggccaacggccaatgagaccacggtggat
ttcccagttttgccgcaatacttggttaagtaccaaaatcctagagaagcagatgcccta
actaaaatacaggaggacttagatgaaacaaagattatcttacatgacacaataaaagct
gttttagaaagaggagaaaaactagatgatttagtggcaaagtcggacagcttgtcttac
cacagtaaagcattctacaagacagccaagaaaactaacagctgctgtagcttttga
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