Choristoneura fumiferana (eastern spruce budworm): 141429679
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Entry
141429679 CDS
T11020
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141429679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfum03036
]
141429679
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
141429679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
141429679
NCBI-ProteinID:
XP_073946210
LinkDB
All DBs
Position
7:complement(9931398..9948529)
Genome browser
AA seq
1576 aa
AA seq
DB search
MEEKMESEQSYSGESSSSSDSCSASGSGSGSSEPDDEPTEPVRVLGQSLELPQDLCENHT
LFKEFFSCKTWEALEDKHKEHLMKYLPQFTQNEEEEKEKTIKMLFDHEPFHFTSPLEVFY
NNLKQGNYRPDIAKMRKFLLKARAKQQKHKIKSYYAKLMPEVLISRERLLAATKAAPPGP
TPRLSPLPQKSSSKNNYKPLYLRARQRYFEELAAIRSEVGGDESEDENYPEGPPEPSNKK
RKQMHTGQNIDTNVSGTLGGIESSHPTSLDCLKNVLAAHRARRQYRENHPELNTTGLTLE
DIKQRVALVNGAKKLMFGGQKSEMPPQKLKRGPKKDSNQKHMKSDAKAVKRKEEESVETK
PLLPNIKIKCEQEESDSESSFVESVGAKHPKKLVDSVEIKQEIVDPKYSDTTNVNYNDPK
LESVIKQEPMDPSLALQNAARLVQPVPIKIEDLDGIDMMALPVELADDTGDMPPEETDEP
DTDEALTETTHANFLSLVRALFPARTAHRASKQQLHARCTAVMRSPIAPLNTWYSLSDDW
CAELDSALDFLAGERGPHPDDFVPYLQYIPETQMYQWIGAGRDCDAILGRLCERWFRAVS
PTPPTDEPPPPRYPTSWVVRPLTSAEIADFRAQERKRYAAAAKPFTYIQHGYRSVVGPCA
RAGLGGAGGALLAAQRPRHASLLALVRDAVARLPNGEGTRHDVLTLLKMSQWIAACSDQA
LLSALSTALDRLLSAKRDPVVKYDQRTAIWTYLHRNRSEEDWIKSTARGRSKPTAHAAPA
PPAAPPAHGRDPRPLTPPPAMELEVGTVEEVIDNVSDSDVDVDDSGASPAAPTLSSAQLL
MQATLTQPQPQPPPKPKPTPKPKPTKPKTPKINVTQPKTAPTQPKTNTAQTKPATQKAMP
QVKPALMAQSAKQASLVAQAVKSNLIAQAAKQANVTTQPAKQVVKATPKTVNVVKQVQKT
NASSVNQPVKVPVKQNVLPPSPKPNPVVKQVAQVVQLPKSSPCVVPPPQSSPLIRQRPLQ
KVEVPQAPIPVSIVVSQPTVPAVSVVQPVTSITLHPGQTKQVNQGTRSLLIRPPAVQTTV
TAVVSTPISQGPANSRRGVVRVLSPATPASGKSLISPRALMQQASTTTAKKRASVPNSSS
ITTLAQGPGSVATMVSAATVAGAGAARGGGGAGAGTRTVQLAGGRTVQLAANQTVHLPGG
QAVQLAARALQLSSLLPARAAKPAPSVHIPVSTVQLTGQTVQLATSGVHLAGQSVQLAQH
TVKLPGGQSVQVSGQNVLPQTVQLPSGQTVQLAGRNLQTVQLGGQNVHLSGQSVQMPAGL
QLGSQTVQLTGQTVQLAGGQTVQLSGGQTLQLPSGQTVQLSSGQTLQLASGQTVQLANQT
PKSMAQVVRTQGVADKPAQPIVAKLLTNAQGQMISLESMMGGRVVSAGRGGRGGRGAARC
ARAAVRVLAPARPLLLAAAKPLHNIILQQSDGSAIRVTSSGAVSSSQTIVLSNIGSQTVT
TPTASAPVLKLQQVNPIQQVKLPQGIKIQQAGTVTSVATPSAVNTVRSVLMDGQQLKLVG
GRHVLARLLRPAHPPQ
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaagatggagagtgagcagagctacagcggcgagagcagcagctcgtccgac
agttgcagtgcgagcgggagcggcagcggcagctcggagcccgacgacgagccgacagag
cccgtgcgcgtgctcggacagagtctcgagttgccgcaggacctatgcgagaaccacaca
ctcttcaaagagttcttctcctgtaaaacttgggaagctttagaagacaaacacaaggag
catctcatgaagtatctgcctcagtttacacaaaacgaggaagaggaaaaggagaagact
atcaagatgctctttgatcatgagccctttcattttacttcacctctagaagtattttac
aataacttaaaacagggtaattacagaccagatattgctaagatgagaaagttcttgctc
aaagctagagctaaacaacagaagcataagataaaatcatactatgctaaactaatgcct
gaagttttgatatctcgcgagcgcttgctagctgcaacaaaggcagcccctccaggccca
acacctcgcttgtctccattaccgcaaaaatcttcaagcaaaaacaactacaaaccacta
tatttaagagctagacagaggtattttgaggagttggctgcaatcagaagtgaggtaggc
ggtgatgaatctgaggatgaaaactatcctgaggggcctccggaaccatctaataaaaaa
cgaaaacaaatgcacactggtcagaatatagacaccaatgtatctggcactcttggaggg
atagaatcttcacatccaacctctttggattgtcttaagaacgttcttgcagctcacagg
gcaaggagacagtatagagagaaccatccagaactgaacacaacaggcttaactctagag
gatataaaacaaagagtagctcttgtcaatggcgcaaagaaactaatgtttggaggacag
aaatctgagatgcctccacaaaaactaaagaggggaccaaagaaagattcaaaccagaaa
cacatgaaatctgatgccaaagcagttaaaagaaaggaggaagagagtgttgaaactaaa
cccctgttaccaaatattaagattaaatgtgaacaagaagagtcagattctgaaagctcc
tttgtggagtcagtgggtgccaaacatcccaaaaaattagttgatagtgttgaaatcaag
caagaaattgtagaccctaagtattcagatacaaccaatgtaaactacaacgatcctaag
ctggaaagtgtcataaagcaagagccaatggatccatccttggcattgcaaaatgctgca
cgacttgttcaaccggtgcccatcaaaattgaagatctggatggaattgatatgatggca
ctacctgtggaactagcagatgatacaggcgacatgcctccagaggaaacagatgagcca
gacactgacgaagccctaacagagacaacacatgccaacttcctgtctctcgtcagggcg
ctgttcccggctcggactgcgcacagggcttcaaaacaacagctacatgcgagatgtacg
gcagtcatgaggtcaccgattgcgccccttaatacgtggtacagcttgtcagatgactgg
tgcgctgaactagattcagccctggactttcttgctggcgaaaggggaccccatcctgac
gattttgtgccatatttacaatatatacctgaaacgcagatgtaccagtggattggcgca
gggagggattgcgatgctatcctaggtcgactgtgcgagcgatggtttcgtgctgtctct
cctactccaccaacggatgaacctccacccccgaggtatccaacgtcgtgggtagtacgg
ccactgacaagtgcggaaatcgcagattttcgtgctcaagagcggaaacgttacgccgct
gccgcaaaaccattcacttacattcagcatgggtaccggtcggtggtgggtccgtgcgcg
cgcgcggggctgggcggcgcgggcggcgcgctgctggcggcgcagcggccgcggcacgcc
agcctgctggcgctggtgcgggacgccgtcgcgcggctgcccaacggagagggcacgcgc
cacgacgtgctcacgctgctcaaaatgtcacaatggatagcggcatgcagcgaccaggca
ttgcttagcgcattgtcgacggcactggatcgcctgctatcggccaagcgtgatcctgtc
gtgaagtacgaccagagaactgccatctggacctatctgcatcggaacaggagcgaggag
gactggatcaagtccacggcgcgcgggcggagcaagcccactgctcacgccgcacccgcc
ccacccgccgcgccgcccgcccatggccgcgacccgcgcccgctcacgccaccccctgcc
atggagctagaagtgggcacggtagaagaagtgatcgacaacgtctcagacagcgacgtg
gacgttgacgacagcggggcgtcccctgcggcccccaccctctcctccgcccagctgctc
atgcaggccacgctgacgcaaccccaaccacaacccccgcccaaacccaaacccaccccc
aaacccaaaccaaccaaaccaaaaactccgaaaataaacgtgacgcaaccgaaaaccgct
ccaactcaacctaaaacgaatactgcgcaaacgaaaccggcgactcaaaaagcgatgcct
caagtgaaaccagcgttaatggcgcagtcggctaaacaagcgagcttagtcgcgcaggcg
gtcaaaagcaacctcatagcgcaggcagccaaacaagctaacgttaccacgcaacccgct
aagcaagtagtaaaagcgacgccaaaaaccgttaatgtcgttaaacaagtgcagaaaact
aatgcgtcatcggtgaatcaaccagtcaaagtgcctgtgaagcagaatgtgctgcctccg
tcgccgaagccgaatccagtggtaaagcaggtggctcaagttgtccagttgccaaagtct
tctccgtgtgtggtgccaccgcctcagagctcgccgttgataaggcagcggcctttgcag
aaagttgaagtgcctcaggctccaatacctgtttcaatagtcgtaagccaaccaacggta
cccgcggtttcggtcgtacagccagtgacgtccataacgctacatcctggtcaaactaag
caggtaaaccaaggcacgaggtcgttgcttataaggccgccagcagttcaaactacagta
acggcggttgtttctacacccatttcgcagggtcctgcaaactcgagaagaggcgtggtt
cgagttctgagtcccgcgacgccagcctccggcaaatctctaatctcgccgcgggcgctc
atgcagcaagcttctacgacgacggcgaaaaagcgagcctcagttccgaatagcagctcg
atcacgacgcttgctcagggtccgggcagcgtggcgacgatggtgagcgcggcaacggtg
gcgggcgcgggcgcggcgcggggcggcggcggggcgggcgcgggcacgcgcaccgtgcag
ctggcgggcgggcgcaccgtgcagctagccgccaaccagaccgtgcacctgccgggcgga
caggccgtgcagctcgccgcgcgcgcgctgcagctctcctctctcctccccgcccgcgcc
gccaagcccgccccctccgtccacatccccgtctccaccgtccaactcaccggccagacc
gtccagctcgccacctccggcgtccacctcgccgggcagagcgtccagctcgcccagcac
accgtcaaactgcccggcggacagagcgtccaagtctccggacagaacgttctccctcaa
acggtccaactcccgagcggccaaaccgtgcaactggccggcagaaatttacagaccgtg
caattaggcggacagaacgtgcatctttccggacagagcgtccagatgccggccggtctt
cagttaggatcgcagacggtccagctgaccgggcagaccgttcaactggccggcgggcag
acggtgcaactctctggcgggcaaactttgcagttgcctagcggtcaaaccgtgcagctg
tcgagcggtcagacgctgcagttagccagcgggcagaccgtgcagctcgccaaccagacg
cccaagtcgatggcgcaagtcgtgcggacgcaaggcgtggcggacaagcccgctcaaccg
atcgtggccaaacttctcactaatgcacagggtcagatgatatccctggagagcatgatg
ggcgggcgcgtggtgagcgcggggcgtggggggcgcggggggcgcggggcggcgcggtgc
gcgcgcgcggcggtgcgggtgctcgcgcccgcgcgcccgcttctactggccgccgccaag
ccgctgcataacatcatactgcagcaaagcgacggtagtgctattcgggtgacgtcgagc
ggcgcggttagttcgtcgcaaactatagtactaagcaacattggttcgcagaccgttaca
acgccaactgcttctgcacccgtgttgaaattacaacaggtcaatccgatacaacaagtt
aaacttcctcaaggaatcaaaatacaacaggcaggcacggtgacgtcagtggcgacacct
agtgccgttaatacggtacgaagcgtcctaatggacggtcaacagctcaaattggtagga
ggacgccacgtactcgcgcggcttctgagacccgcacaccccccacagtga
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integrated database retrieval system
