Choristoneura fumiferana (eastern spruce budworm): 141429931
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Entry
141429931 CDS
T11020
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03030
DNA replication
cfum03410
Base excision repair
cfum03420
Nucleotide excision repair
cfum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141429931
03410 Base excision repair
141429931
03420 Nucleotide excision repair
141429931
03430 Mismatch repair
141429931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfum03032
]
141429931
03036 Chromosome and associated proteins [BR:
cfum03036
]
141429931
03400 DNA repair and recombination proteins [BR:
cfum03400
]
141429931
DNA replication proteins [BR:
cfum03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
141429931
DNA Replication Termination Factors
ELG1-RFC complex
141429931
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
141429931
DNA repair and recombination proteins [BR:
cfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
141429931
Check point factors
HRAD17(Rad24)-RFC complex
141429931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rep_fac_C
AAA_30
AAA_16
AAA_22
AAA_24
Gp44_lid
Mg_chelatase
RuvB_N
AAA_11
Rad17
bpMoxR
SLFN-g3_helicase
AAA_19
AAA_3
DUF815
AAA_assoc_2
AAA_5
AAA_28
AAA_7
Motif
Other DBs
NCBI-GeneID:
141429931
NCBI-ProteinID:
XP_073946592
LinkDB
All DBs
Position
Z:17115472..17126004
Genome browser
AA seq
350 aa
AA seq
DB search
MQAFLKTGKISTSGAPTVSGPKSTKKKPPAPWVEKYRPRTIDDIVDQGEVVQVLRQCLSG
GDLPHLLFYGPPGTGKTSAILAAARQLFGDITRDRVLELNASDERGIQVVRDKVKSFAQL
TVSSTKADGQPCPPYKLVILDEADSMTTAAQAALRRTMERETRTTRFCLICNYVSRIIPP
ITSRCSKFRFKPLARENVIKRLREICEAEGVEVGEGEVLHQAVDTCEGDLRRALTALQCC
QRLLGGVTADGLVEVTGLVPDVLVNEYLGIKNYAELEQFVETFLMEAFSASQLLEQASAA
TVMAGHLTNKQKCAISEKLAVCAHRLQDGGAEVMQLTDLGCTIIMANNNP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcttttctgaaaactggcaaaatttcaacttcgggtgccccgacagtttctggc
ccaaagtcaacaaagaaaaagcccccggcaccatgggttgaaaaataccgtccacgaact
atcgacgatatcgttgaccagggcgaggtggttcaagttttacgacagtgtctgtctggg
ggcgatctgccgcatttattgttttacgggcccccggggactggcaagacgagcgctatc
ctggccgctgcccggcagctgtttggcgacatcacccgcgaccgcgtgctggagctgaat
gcgtccgacgagcgaggcattcaagtggtcagagacaaagtcaaatcctttgctcagcta
accgttagcagcactaaagctgatggccaaccatgcccaccatacaaactggtaatattg
gatgaagctgactccatgaccacggcagcccaggcggcactgcgccgcaccatggagcgg
gagacgcgcacaacacgcttttgcctcatttgtaactatgtgtctcggatcatccctcca
attaccagtcgctgctccaaattcagatttaagccacttgcccgggaaaatgttataaaa
aggctacgtgagatttgcgaagcggagggcgtggaagtgggtgagggggaggtactgcac
caagcggtggacacctgtgaaggagacttgcgccgcgcgctcaccgccttgcagtgttgc
cagcgtttgctcggaggagtcaccgctgacgggcttgttgaggtgacaggtctagtgcca
gatgtactagtcaacgaatacctcggcatcaagaattacgctgaactagagcagtttgtc
gaaactttcttgatggaggcgttttcggcgtcccagctgctggagcaggcgtcggctgca
acggtgatggcgggtcatctgaccaacaagcagaaatgtgcgatcagcgagaagctggcg
gtctgcgcgcaccggctgcaggacggcggcgccgaggtcatgcagctcacagacctcggc
tgcaccatcatcatggctaacaacaacccttga
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