Choristoneura fumiferana (eastern spruce budworm): 141429970
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Entry
141429970 CDS
T11020
Name
(RefSeq) LOW QUALITY PROTEIN: embryonic polarity protein dorsal-like
KO
K09254
c-Rel proto-oncogene protein
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09150 Organismal Systems
09151 Immune system
04624 Toll and Imd signaling pathway
141429970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfum03000
]
141429970
Transcription factors [BR:
cfum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
141429970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
LIP1
Motif
Other DBs
NCBI-GeneID:
141429970
NCBI-ProteinID:
XP_073946604
LinkDB
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Position
8:69..3290
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AA seq
732 aa
AA seq
DB search
MDDIGDVLQLGVTQNDGETRANLNISDVFEAISIADPSFGVSVVEEMYRPPPAPAPVPSG
ALDRPYVRILEQPAGKSLRFRYECEGRSAGSIPGASSTPERKTYPTIEVCGYKGRFVVLV
SCVTKDRPYRPHPHNLVGREPACSRGVCTVEMNGDSSTVQFSNLGIQCVKRKDIAEALRA
REEMKVDPFKTGFGHKTQPQQIDLNAVRLCFQVYIPGEKTSKIKQALHPVVSDVIYDKKA
MCELQINRISTCAGSVKGGTELILLCEKVTREDIEVVFSQKFDDGYVWESAANILLVHKQ
VAIAFQAPPYRDLNCTEHVKVQICLRRISDQARSTPVDFEYTPDFAGTRNKPLPDPGVLA
LLLAGKPDTNNNDKDKDNTVSSSSDSVSVSVSDESGSATIADLNGNIIPPDNEKSLNELL
DQVAELDEIYTENRTRLQNVTALETDDVEDFNDAGTYTSLQLAFRNPVLISEPETYEDVQ
VQTYRGPIIEFAPLKRDTDEERAPPLPPKRVRKAPSVEGFKTSQTSVNSFLKPGKQLPIT
RNLDTSRTELSVARSEPALPPAPKKRSFLSRLFRRKEKSPAPSVKSEGPVKKSKPVGRSV
SSVSGHRPSKFKTSISHTSLKDNASGTGLSYADSITHISLHGDENEKNTSQTRLSRPSSL
APLPPTDGDTILVAESVLALDASQFKKLQDDLDLTDAEHYALYMAVAPHATVSEFDETSC
YYSPVDGSKFQN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacgacatcggagatgtactgcaacttggtgtaacgcagaatgacggcgaaactcgg
gccaacctgaatataagtgatgtgtttgaggccatctcgatcgcggacccgtcattcggc
gtgagcgtggtagaggagatgtaccggccaccgccggcgcccgcgccggtgccctctggc
gcgctcgaccggccctacgtgcgcatattggaacagcccgccggcaagtcgctcagattt
cgatatgagtgcgaagggcggtcggcgggatcgattcccggcgccagcagcacgcccgaa
cggaagacgtatccgaccatcgaggtgtgcgggtacaagggccggttcgtggtcctcgtc
tcctgcgtcaccaaggacagaccctacaggccgcatccccacaacctggtggggcgcgag
ccggcgtgcagccgcggcgtgtgcaccgtcgagatgaacggcgactcctccacggtccag
ttcagcaacctgggcatccagtgcgtcaagaggaaggacatcgctgaagccctcagggcg
cgggaggagatgaaggtcgacccttttaaaaccggcttcggccacaagacgcagccccag
caaatcgacctgaacgccgtccggctctgcttccaagtgtacataccgggcgagaagacg
tccaagataaagcaggcgctccaccccgtggtctccgacgtcatatacgacaagaaggcg
atgtgcgagctgcagataaacaggatcagcacgtgcgccggcagcgttaaaggcggcacg
gagctcatactgctctgcgagaaggtgacccgggaggatatagaagtggtgttcagccag
aagttcgacgacggctacgtgtgggagagcgcggctaacatcttgctggtgcataagcag
gtcgccatagcgttccaggcgccgccctacagagaccttaactgcactgaacacgtcaag
gtccagatctgcctccggcgcatatccgaccaggcccgaagcacccctgtggacttcgag
tacacgccggacttcgcaggtacccgcaacaagccgctgcccgacccgggagtgctggcc
ctcctgctggccggcaagcccgacacaaacaacaacgacaaagacaaagacaacaccgtc
agctcctccagcgactccgtgtccgtctccgtctccgacgagagcggctccgccaccata
gcggaccttaacggcaacatcatccccccagacaacgaaaagagcctcaacgaactctta
gaccaagtcgctgagctcgacgagatatacacagagaaccgcacgcgcctccaaaacgta
actgccctcgaaaccgacgacgtcgaagacttcaacgacgccggcacttacacctccctc
cagctcgctttccggaaccccgtcctcatatccgaaccggaaacgtacgaggacgtccaa
gtacagacttaccgcggcccgatcatagaatttgctcctttgaaacgcgacactgacgag
gaacgagccccccctctgccccccaaacgcgtccgcaaagcgccctctgtcgaaggcttc
aagacttctcaaacatccgtgaacagcttcctaaaaccgggcaaacagttacccatcacg
cgtaatttagacaccagtcgtactgaattatccgtagctcgcagcgagcccgcgctgccg
cccgctcccaaaaaacgttcgttcctatcccgtctgttccgacggaaggagaagtccccc
gcgcctagtgtcaaatccgaagggcccgtcaaaaagtcgaaacctgtcggccgttccgtc
agcagcgtctccgggcatcgtccctccaaattcaaaacttcaatatcccacacgtctctt
aaagacaacgcttctggaactggtctgagctacgctgatagcatcacccacatatctctc
cacggcgatgagaacgagaaaaacacctctcaaactcgcctgtcccggccatctagcttg
gccccccttccaccaacagatggagacactatcctagtagccgaaagcgtgctagctcta
gatgcttctcaattcaagaagctacaagacgacttggatctaacggacgcggaacactac
gctctctatatggccgtagcgccgcacgcgaccgtgtcagaatttgacgaaaccagctgc
tattattcgccggtagatggcagcaagtttcagaattaa
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