Choristoneura fumiferana (eastern spruce budworm): 141430072
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Entry
141430072 CDS
T11020
Symbol
SmE
Name
(RefSeq) small ribonucleoprotein particle protein SmE
KO
K11097
small nuclear ribonucleoprotein E
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141430072 (SmE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfum03019
]
141430072 (SmE)
03041 Spliceosome [BR:
cfum03041
]
141430072 (SmE)
03032 DNA replication proteins [BR:
cfum03032
]
141430072 (SmE)
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
141430072 (SmE)
Spliceosome [BR:
cfum03041
]
Complex A
U1 snRNP components
Sm proteins
141430072 (SmE)
U2 snRNP components
141430072 (SmE)
Complex B
U1 snRNP components
141430072 (SmE)
U4/U6.U5 tri-snRNP components
141430072 (SmE)
Complex C
U2 snRNP components
141430072 (SmE)
DNA replication proteins [BR:
cfum03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
141430072 (SmE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Phage_SPbeta_YorH
Motif
Other DBs
NCBI-GeneID:
141430072
NCBI-ProteinID:
XP_073946717
LinkDB
All DBs
Position
8:20059165..20059728
Genome browser
AA seq
95 aa
AA seq
DB search
MAYKGPPKVQKVMVQPINLIFRYLQNRSRVQVWLYENVNLRIEGHIVGFDEYMNIVLDEA
EEVHMKTKKRKQIGRIMMKGDNITLIQNVNPNAAV
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggcatacaaaggcccaccgaaagttcagaaggtgatggtacagcccatcaaccttatc
ttcagatatttacaaaatagaagcagagtccaagtttggttgtacgaaaacgtaaatcta
cggatcgagggtcacattgtcggctttgacgaatacatgaatattgtgctggacgaagct
gaagaagtgcatatgaagaccaaaaagaggaagcaaatcggaagaataatgatgaaagga
gataatattacgcttatccaaaacgtcaacccgaacgctgcagtgtaa
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