Choristoneura fumiferana (eastern spruce budworm): 141430094
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Entry
141430094 CDS
T11020
Symbol
Tmf
Name
(RefSeq) LOW QUALITY PROTEIN: TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141430094 (Tmf)
Membrane trafficking [BR:
cfum04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
141430094 (Tmf)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_DNA_bd
TMF_TATA_bd
CCDC39
KIF21A_4th
Motif
Other DBs
NCBI-GeneID:
141430094
NCBI-ProteinID:
XP_073946741
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All DBs
Position
8:1092057..1114115
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AA seq
1152 aa
AA seq
DB search
MNWFDTSGLTSLAKTALKEAQKTLDKALDIQDESGEEEEAGAAASDVKSSPGRSESPQKD
NTDFFSSWGLTVSAEGPQSVNEQAVVTESPSKASSQSLWGSFAGSFFEHPNNAENDAAIV
QPPKAKSMNVINDSKYGSATDLFAKSQLVMSDETEFDVKKAKEEAKAEERRNSSRSNRLS
LVSSLNSSDSVEVLSQSLKTTPDSEAASVHSISHSSSTGQKLNSESVEILPDSLVSPSSI
ECLGFDSYSSDKNSSSSSNLSPGKFSDKKSTPVDRTEKAETADSVSLVADDDDDTMSYNS
ISECTAPTVLDTDEKSISPFPKRVESKKLIEKEFLLLDPLLLPQKMQVSENSSNDGSWSD
RTLNADNDSMVLDVTVEEPKKEPEAEDTLMEKLSDSSSFYNVNVSSEMLKSESSAFVNVE
KQQCSQSEKSESLKDSIKERTSPTSSESKSDLVKIGSDRTSGHTSGDEMETTTSSDIEII
PSPNGDGHGFCRNSPAKYNFKQSKFDGTTSPNLVDLVLGKSLATKIRGHNRELSEASIQS
NTSDDSQGSENDRLMRRLCEMAEILEARENRLMEVSRSNAELAESNADLKSQMETMLAKH
GTHEGGDINTITEDYTQRMSALEKKFQQAIREKDQLRKQLDSIKSESSRKLSSELEGSLR
EKDDVIAQLQEEGEKLARQQLTHSNIIKKLRAKEKDNEQVIKGLRDKIAEQSSELDRLKR
AIAAKEELEVSQIEAVYRLTTANKKLDTELNETKSALDDTTQRLNTTRSSLEAAKRELAE
VEAERVELRARCGAAARDKRDADADREQRDALANQLASLRQEMVQEERRWVGREEALRAE
LAEARELAAALERAGGRGRGAGAAGAGAAPLLAQLAALQRSALDRDQAHAHTLRTLQRGH
AEVETSLAKAVERERLSREECDELARRLATAEGLLDDTRARLEHEAARATELQARVAAGD
HEIHSLSRELSLVQEESKTALAELRRRLAEAEAALASAKDALDVEKKRNAILQEQLSSRG
DASPPHSVASDTLSSTLWASEETGRATPTPIVTAAGVDDLLSQLQRRDGELRAAAARAQH
LAGERDALRGHVGELRARVDDYQSLQEQYDALLQMYGEKEEQLEELKLDLQDVTQLYKAQ
LDELVALKRAPR
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgaattggttcgatacttcggggctgacgagcttggcgaagacggccctgaaggaggct
caaaagaccctggacaaggcgctggacatccaggatgagagcggggaggaggaagaggcg
ggggcggccgcctctgacgtcaaatcgtctcctggtcggagcgaatcgccccaaaaggac
aacacggatttcttctcctcctggggactcacggtcagcgccgagggcccacaaagcgtc
aacgagcaagcagtagtcactgaaagcccttctaaagcctcttctcaaagtctctggggt
tcttttgctggttctttctttgaacacccaaataatgccgaaaatgatgctgctattgtc
caacctccaaaagctaagtctatgaatgtcatcaatgattcgaaatacggcagcgccact
gacctctttgcgaagagccaacttgttatgtcggacgaaactgaatttgatgtaaagaaa
gctaaagaggaagcaaaggctgaagagagacgaaattcatctcgctctaatcgactgtcg
ttagtatctagtctgaacagctcggactctgttgaagtattatcccaaagtttaaagaca
acacctgactcggaggctgcatcagtgcactctatatcgcacagcagtagtacagggcaa
aaactgaattctgaatctgtggaaattctacccgatagccttgtcagtcccagctctata
gagtgtttagggtttgacagctactctagtgataaaaacagtagctcatcttcgaatcta
tcaccaggaaagttcagtgacaaaaagtctaccccagtagataggacagagaaggcagag
accgcagacagtgttagcttggtagcagatgatgatgatgacaccatgtcttacaattct
atctctgaatgcacagcacctaccgttcttgatacggatgaaaaatccataagcccattc
cctaagagagttgaaagtaaaaaattgatagaaaaagaatttttacttcttgatcctctt
ttgttgccgcagaaaatgcaggttagtgagaactcttctaatgatggctcttggtctgat
cggacattgaatgctgacaatgacagtatggttttagatgttacggttgaggaacccaag
aaagaacctgaagctgaggatacattgatggaaaaactgagtgattcatcctcattctac
aatgttaatgtctctagtgagatgcttaagtcagaaagctcagcatttgtgaatgtggaa
aagcagcaatgcagccaatcagagaaatcagagtcactcaaagacagtattaaagagcgg
acatcaccaacaagttcagagagcaaaagcgatttagtcaaaataggctctgacagaact
tctggccacacatctggtgatgaaatggagacaacaacatcttcagacatagaaattatt
ccaagcccaaatggggacggccatggtttttgccgcaacagtccagccaaatacaacttt
aaacaatctaaatttgacggaacaacttccccaaacttagtagatttagttttgggcaaa
tccttagcaactaagatccgtggccacaaccgagagttatctgaggcttcaattcagagc
aatactagtgatgacagccagggttcggagaatgatcgcctcatgagacggctttgcgag
atggcggagattttagaagctagagagaatagactgatggaagttagtagaagtaacgca
gagcttgctgagagcaatgcagatttgaagtcgcaaatggagacaatgttggctaagcac
gggacgcatgaaggaggcgatattaacactattacagaggactatacacagaggatgtca
gctctagaaaagaaatttcaacaagccattagagaaaaggaccaattacgcaaacagctg
gacagcatcaagtcggagtcgtcccgcaagctgtcatctgagctggagggcagtctgcgc
gaaaaggacgacgtgatcgcgcagctgcaggaggaaggagagaagctggcgcggcagcag
ctcacgcactccaacatcattaagaaactgagagccaaggagaaggataatgagcaagtc
attaaggggctaagggataaaatagctgagcaatcctcggagctggaccgcctgaagcgc
gccatcgcagcgaaggaagagctggaggtttcgcagattgaggccgtgtacaggctcacc
accgccaataagaagttggacacggagctgaatgagacaaagagcgcgttggacgacacg
acgcagcggctgaacacgacgcggtcgtcgttggaggcggccaagcgcgagctggccgag
gtcgaggccgagagggtcgagctgcgcgcgcgctgcggggccgccgccagggacaagagg
gacgccgacgcggaccgggaacagcgggacgcgctggccaaccagctggctagcttgcgg
caggagatggtgcaagaggagcgccgctgggtggggcgggaggaggccttgcgggcggag
ctagcagaggcccgcgagctagcggcggcgctggaacgcgcggggggccgcgggcggggc
gcgggagcggcaggggcgggggccgccccgctcctggcgcagctggcggcgctgcaacgc
tcggcgctggacagggaccaggcgcacgcgcacacgctgcggacgctgcagcggggccac
gcggaagtcgaaacctcgctggcgaaggcggtcgagcgcgagcgtctctcgcgggaggag
tgcgacgagctggcgcggaggctcgccaccgcagagggactgctggacgacaccagggcc
cggctggagcacgaggcggcgcgcgccacagagctgcaggcgagggtggccgccggggac
cacgagatacatagcttgtcccgcgagctgtccctcgtgcaagaggaaagcaaaacggct
ttggcggagctgcgccggcggctagcggaggcggaggccgcgctcgcctccgctaaagac
gcgctggacgtcgagaagaaacgaaacgccatactgcaagagcagctgtcgtcccgcggc
gacgcgagcccgccgcactccgtggcctccgacacgctgtcctccacgctgtgggcttcc
gaggagacggggcgcgcgactccgaccccgatcgtgacagccgcgggggtcgacgacctg
ctgtcccagctgcagcgccgcgacggagaactaagggccgccgcggcgcgggcccagcac
ctggccggagagagggacgcgctgaggggccatgtgggggagctgagggccagggtggac
gactaccagagcctccaagagcaatacgacgccttgctacaaatgtacggcgagaaggag
gaacagctggaagagctaaaactagacctgcaagacgtgacccagctgtacaaggcccag
ctggacgagttagtggccctcaagcgggccccgaggtag
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