Choristoneura fumiferana (eastern spruce budworm): 141430102
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Entry
141430102 CDS
T11020
Name
(RefSeq) LOW QUALITY PROTEIN: netrin-1-like
KO
K06843
netrin 1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cfum00536
]
141430102
Glycosaminoglycan binding proteins [BR:
cfum00536
]
Heparan sulfate / Heparin
Axon guidance molecules
141430102
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
NTR
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
141430102
NCBI-ProteinID:
XP_073946745
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Position
8:1677691..1952064
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AA seq
606 aa
AA seq
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MPARAVALLATAALALAAAPPDPCYEDGRPRRCIPDFVNAAFGAPVAASSICGRRGPERL
CDXSGDQIPENACRVCDAARSDRRNAPNYLTDLNNAHDATCWRSAALAPASYDSPPDNVS
LTLSLGKKYELTYVSLQFCPKAARPDSVAIYKSADHGTTWQPFQFYSSQCRRVYGRPNKA
TVTSANEQEARCSDSHRLAGENAGGARLAFSTLEGRPSAANFDISPVLQDWVTATDVRVV
FNRLHMMSEGDEVDPKKQAAAGTQHYAVSDFAVGGRCKCNGHASRCVPMKDEEGSTQQLS
CECRHNTAGRDCERCKPFHFDRPWGRATARDANECKECNCNGHARRCRFNMELYKLSGRA
SGGVCLKCRHFTAGRHCHYCREGYYRDPAKPITHKKACKPCDCHPVGASGKTCNQTSGQC
PCKDGVTGTTCNRCAKGYQQSRSHIAPCIRIPRVVTAVQAMEAVDGEPGRAADQCGRCRA
GARTLNLNKFCSRDYVIMGKVVGREPSAAGAEWVRLSLSVQAVYKRGPRSRLRRGAAGLF
VRARDLACKCPKLKINKSYLILGVEKEGTSSGLPGLTVGERTLLLEWRDDWHRRIRRLQR
RAINCH
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccgcgccgtggccctgctggccaccgcggcgctcgccctcgccgccgccccg
cccgacccctgctacgaggacggccgcccccgccggtgcatccccgacttcgtcaacgcc
gccttcggagcccccgtcgccgcctcctccatctgcggcaggcgaggccccgaacgcctc
tgcgacncctccggagaccagataccagagaacgcctgccgagtctgcgacgccgctcgc
tccgaccgccgcaatgctcctaactacctcaccgacctcaacaacgctcacgacgctact
tgctggcgatccgccgccttagctccagcttcctacgactcccctcccgacaacgtctct
ttaacactttccttgggtaaaaaatacgagttgacgtacgtgagcctccaattttgtcct
aaagcggcgcggccggattccgtagcgatctacaagagcgctgatcacggcacgacctgg
cagccttttcagttttactcgagccagtgccggcgggtgtacgggaggcctaataaggct
accgtgacctccgccaacgagcaggaggctaggtgttcggattcgcatcgtctggccggg
gagaatgcgggcggagcgcggctggcattcagtactttagagggtcgcccgagcgccgct
aactttgatatatcccctgtgctccaagattgggtgaccgctacggatgttcgggttgtt
tttaatcgtttgcacatgatgagcgagggggatgaggttgatccgaagaagcaggcggcg
gctgggacgcagcactacgcggtgtcggactttgcggtgggtggtcggtgcaagtgtaac
ggacacgcctcgcgctgcgtgccgatgaaggacgaggaagggtccacgcagcagctgtcc
tgcgaatgccggcacaacacggctggccgggactgcgagcgatgcaagccgttccacttc
gaccggccctggggacgagccacggctagagacgccaacgaatgcaaagaatgcaactgc
aacgggcacgcgcgccgctgccgcttcaacatggagctgtacaagctgtctggtcgcgcc
agcggcggcgtgtgcctcaagtgccggcacttcacggccggccggcactgccactactgc
cgcgagggctactaccgcgaccccgccaagcccatcacgcacaagaaggcgtgcaaacca
tgcgactgtcacccggtgggagcgagtgggaagacgtgcaaccagacgagcgggcagtgc
ccgtgcaaggatggcgtaacgggcacgacctgcaaccgctgcgccaagggctaccagcag
tccaggagccacatcgcaccctgtatacgtataccgcgagtggtgacagctgtgcaagcc
atggaagcggtggacggcgagccgggccgcgcggcggatcagtgcggcaggtgtcgcgcc
ggcgctcgcacgctaaatctcaacaagttctgcagccgagactacgtcataatgggcaag
gtggtcggtcgcgagcccagcgcggcgggcgcggaatgggtgcgtctgtcactgagcgtg
caggcggtgtacaagcgcggcccgcgcagccgcctgcgccgcggcgccgccggcctcttc
gtgcgcgcgcgggacctcgcgtgcaagtgcccgaagctcaagattaacaagtcataccta
atcctaggagtggaaaaagaaggtacctcatcaggtttgccgggtctgacggtcggcgag
cggacccttctgctcgagtggcgcgacgactggcaccggcgcatacgccgcctccagcga
cgcgccatcaactgccactaa
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