Choristoneura fumiferana (eastern spruce budworm): 141430548
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Entry
141430548 CDS
T11020
Name
(RefSeq) uncharacterized protein
KO
K20493
leucine-rich repeat-containing protein 16
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141430548
Membrane trafficking [BR:
cfum04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
141430548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RVT_1
Carm_PH
CARMIL_C
LRR_4
DUF1281
DUF7083
Motif
Other DBs
NCBI-GeneID:
141430548
NCBI-ProteinID:
XP_073947399
LinkDB
All DBs
Position
8:complement(15730962..15768411)
Genome browser
AA seq
1594 aa
AA seq
DB search
MTLKKIKKMSTKSQISTELSDSISNVLGKNVKILYKSLIRMESRGDKVDNKVLVVTSYRI
FITTTKVPTRVDNGFHLMEIEAIESKKANHLSITLIHEHKPVSILIGEEKASEGVINVMH
ALVAAFDDLYPNVAIEDIICKVNLPFQLQQVSGTRKHSTCGDFSNQYAAMCDLCQTPFRA
EVAWDIDTIYLAHDIRMLHLKDFDHLDQRDLIPLLIALQHNTWFTGVCGDGVRVGSEAWE
ALSRVVRCAAPPPQKLSWRAAALRHDHAARLGHAMSRARRLPAMHTIDFSQNHIEDKGAI
SILSGLANNPDGLRHIALSQCGLTGKTVSHLATMLNDNPCHLSTLSHLDLSHNNLKDDVH
NLYNFLAQPNVLTHLNLTNTETTLENMWGALLRGCAARLAELLVGRNPWSSARRPKDPPP
SFRQFFTACLALSTLDFSYCKMLPDALKSLLLGLACNESATGVKLNLSGVLSSSQAAHVL
ESCIHGVRCLQSLDLSDNSMELELSGIVRAIGKNHSIHQLSLSRLTGKRSYAPPLIQALV
HVLQEPDTALTSLDLSDCKLKGDLYGLLNALGGARRLRSLDVGGNLAGDAGARLLAKALQ
CNCTLHTLYIDRNAFSLQGLTDIATALRRSVSVRRVEFPGCDAAAGGRGASERVAALWRE
LHERLAVNSAPATTHTLRAMALERAWGGGEAGAALAAQAAAALPPPPLPAALERAAAAAH
HLLHQYLQRCSEVFAAMGGGGAGELVPLQAVRDAMAPCASTLQDLLNEAVENLALSACEG
VDSGDSDPVPSSDADIPDLLTPISHSAATPLGCRRRERGGTRRVRPKSVAEQQCSSNEML
SLPPLHGEAGDALADLPAHTLRHLVKGRPRRVKTRAPSRPITDQSQDIDEGLDEFWRTCR
TPPGSEEASLSARTPLTSRSLVRCRLSLRLSPLRRSPTLLRDDTISYRIRITGENYREQL
FFALEASGPLESVQKRALFLSQCGKEAFALIVSLLSPKRPSEVEFDEIVELLNQFFVPTP
HPILETEKFYNRKQRSNESITSFVAALHDISSRCKFSDMPRRIVEQIILGVKDGGLKKEL
LKIEVIDLTYDKVVQRALNYEAVSESSVSARTHCDVTLMSPSTSADSSEPMDVNAVQTKQ
CVHCAKRHANLRCKFRNATCYKCHKKGHTKAACEANLNKTGKTHVNKCDECCSASDGESS
VKEDSAEDNHGINGIYDRVHGMSGAGTARVRPVMVQLTANGVPLVMEVDSGSARTILPHS
LYRQHRQAFLAQPTPCKTKLVTWTDDVLKIVGEMIVDVVYNGISVKLPLLVSCGKGPALL
GRAWFEPLGISIQGVNSVIEETVDFASKFPQLFDDSMDKYSGPLVHIDCKEGVSPVFLRC
RPVPFPLREKVNEQLNKMVTDGIISPVKHSRWATPLTIVPKPDGSLRLCGDYRSTVNASC
LADSYPLPTSNEAFFALAGGKYFSKVDLKQAYNQLKVDDETAELLTLNTPLGLMRMNRLA
YGVNAATAIFQRLMSSILAGIQGVACLLDDVVVCGSTLQEHNERLLLVLKRLEDLGLKLN
RAKCIFSSRRVTFLGYEIDDTGVHPSKEKIRDIF
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgacattaaagaaaatcaaaaaaatgtcaacaaaatctcaaatatctaccgaattgagt
gacagcatcagtaatgtattgggaaaaaatgttaaaatactttacaaatccctcattcgc
atggaatcgagaggtgacaaagtggataacaaagtattggttgtcacatcttatagaatc
tttataacaacaactaaagttccaacaagggtggacaatggatttcacttgatggaaata
gaagcaattgaaagcaaaaaagccaatcatctgtcaataaccctcattcacgagcacaag
ccagtgtccattctcatcggggaagagaaagcatctgaaggcgttataaatgttatgcat
gcgctcgtagctgcgtttgacgatttgtatccaaatgtagccatagaagatataatctgc
aaggtaaatttacccttccaactacaacaagtcagtgggacaaggaaacattccacttgc
ggcgatttttccaaccaatatgcagctatgtgtgatctttgccaaaccccatttagggct
gaggtggcgtgggacattgatacaatttacctagcgcatgacataagaatgttgcatcta
aaggatttcgatcatttggaccaaagggatctcatcccacttctgatcgcgctgcagcac
aacacttggttcactggggtctgcggcgacggcgtgcgagtcggcagcgaggcgtgggag
gctctgtctagagtcgtgcgctgcgcggcgccgcccccgcagaagctgagctggcgcgct
gcggcgttgcggcacgaccatgcggcgagactggggcacgctatgtcgcgcgctcgaagg
ctccccgccatgcatactatagacttctcgcagaaccatattgaagataaaggtgcaatc
agcattttgtcgggtctcgcgaacaaccccgacggtctccgacacatcgctctgtcgcag
tgtggtttaacgggcaagacggtgtcgcacctcgccacaatgttgaacgacaatccttgc
cacctgtccacgttgtcgcatttggatctgtcacataacaacctcaaggacgatgttcat
aatttatacaacttcctggcgcagcccaatgtgttgactcatttaaatttgacgaacacg
gaaactactcttgaaaacatgtggggagcattacttcgcggttgcgcggcgcgtctggcg
gagctcctagtgggccgcaacccgtggtcgtccgcgcgccgccccaaggacccgccgcca
tctttccgccaattcttcaccgcttgcctggccctcagcacgctcgacttctcatattgc
aagatgctgccggatgccctcaagagcctgctgttagggctggcttgtaacgagagtgcg
acgggcgtaaaactgaacctctcgggcgtcctgtcgtcgtcacaggcggcgcacgtgctc
gagtcctgcatccacggcgtgcggtgcctgcagtcgctcgacctctccgacaacagtatg
gagttggaactctctggaatagtgcgagccataggcaaaaaccattcaattcatcaattg
tcacttagccggctgactgggaaaagatcttatgcgcctcccttaatacaggcactagtc
catgttttgcaagagccagacacagctttaacttctctcgatttaagcgattgcaaactg
aagggcgacttgtacgggctgctgaacgcgttaggcggcgcgcggcgtttgcgctcgttg
gacgtcggcggcaacttggccggcgacgcgggcgcacggcttctggccaaagcgctgcag
tgcaactgcacgctgcacacgctgtatatcgaccggaacgcgttcagcttgcaagggctg
acggacatagcgacagcgctgcgtcggtcggtgagcgtgcggcgggtggagttcccgggc
tgcgacgcggcggccggcgggcgcggcgccagcgagcgcgtcgcggcgctgtggcgagag
ctgcacgagagactggccgtgaactcagcgccggcgacgacgcacacgctgcgcgcgatg
gcactggagcgcgcgtggggcggaggcgaggcgggcgccgcgctggccgcgcaggccgcc
gccgcgctgccgccgccgccgctgcccgccgcgctcgagcgcgccgccgccgccgcgcac
cacttgctgcaccagtacctgcagagatgcagcgaagtgttcgcggcgatgggcggcggc
ggggccggcgagcttgtcccgctgcaggcggtgcgagacgctatggcgccctgcgcctct
actctacaggatctgcttaatgaggcggtggaaaacttggctctctcggcgtgtgaaggt
gtggacagtggcgacagcgatccggtaccaagcagcgacgcagatattcccgacctcctc
actcctatatcgcattccgcggcgacgccgctggggtgccggcggcgggagcgcggcggc
acgcggcgcgtgcggcccaagtcggtcgcggagcagcagtgcagcagcaacgagatgcta
tcgctgccgccgctgcacggcgaggcgggtgacgcgctcgccgacctgcccgcgcacacg
ctgcgacacctcgtcaagggacgcccgagaagagtaaaaacaagagcgccatctcgaccc
atcactgatcaatcacaagacatcgacgaagggctggacgagttctggcgcacgtgccgc
acgccgccgggcagcgaggaggcgtcgctgtcggcgcgcacgccgctcacgtcgcgctcg
ctggtccgctgtcgtctctcgcttcgcctctcgccgctgcgccgctcgcccacgctgctg
cgggacgacaccatttcataccgaataaggataactggggaaaactaccgcgagcagctg
ttcttcgcgttggaggcatcaggcccattggaaagcgtgcagaaacgtgccttgtttttg
tcacaatgcggcaaggaggcgtttgcattgattgtgtctttgttatcaccaaaaaggccc
agtgaagtcgaatttgacgaaatagttgagttgttgaaccaattctttgtacccacaccg
catccgatattagaaactgagaaattctacaacaggaagcaaaggagcaacgagtcaatc
acaagtttcgtggcggcgttgcacgacatcagctcccgttgtaagtttagtgatatgccg
cgccggatagtggagcagattatacttggggtcaaagatggaggattaaaaaaggagctt
ctgaaaatagaggttatcgatttaacatatgacaaagtggttcaacgtgcgcttaattat
gaggccgtttccgagagtagtgtatcagcgagaacacattgtgatgtcactctgatgagt
cctagtacgagcgcagattcgagtgagccaatggatgtaaacgctgttcaaacgaaacag
tgcgtgcattgtgcaaagcgacacgctaatttacgttgtaagtttcggaacgcaacgtgt
tacaaatgtcacaagaaaggacataccaaagccgcctgcgaagcaaacttgaataaaacg
ggaaaaacacacgtaaacaaatgtgacgagtgttgctcggcttccgacggggaatcaagc
gtcaaagaagacagcgcggaagacaatcacggcattaatggcatttacgacagagtgcac
ggcatgtcgggcgccggcaccgcgcgcgtgcggcctgtcatggtgcaactgacggcaaac
ggcgtgccgctggtgatggaggtggactccggctccgcgcgcaccatcctgccgcacagt
ctgtaccggcagcaccgtcaagcgttcctcgctcagccgacaccgtgcaagaccaagtta
gtcacatggacagatgacgtgttgaagatcgtaggcgaaatgatagtggacgttgtatac
aacggtataagtgttaagttaccgttgttagtgagttgcggcaagggtccggcgttacta
ggacgtgcgtggttcgagcccttaggcatttcgattcagggcgtgaactcagtaatcgaa
gagacagtggactttgcatcgaagtttccgcagctgtttgacgacagcatggacaagtac
agtggaccgctagtgcatatagactgtaaggaaggagtgagtcctgttttcttgcgttgt
cgtcctgttcctttcccgttacgtgagaaggttaatgaacagttaaacaagatggtgaca
gacggaataatctcgccggtaaaacactcgcgctgggcaacaccactgactatagtgcct
aagcccgatggatcgctacgactatgtggagattataggagcacagttaatgcgtcgtgc
ctagctgacagctacccactgccgacgtcgaacgaagctttttttgctttggcgggggga
aaatatttttcaaaggtggacctcaagcaagcgtacaaccagttaaaagtagatgatgag
acagcagagcttctcacactcaacacacccttggggttgatgagaatgaatcgactggct
tatggtgttaatgctgcgacggcaattttccagaggctaatgagttcgatactggcggga
atacaaggagttgcctgtttacttgatgatgtggtggtctgcggctcaacgttacaagaa
cacaatgagagacttttgctggtactgaaaaggcttgaagaccttggactgaagttaaat
agagcgaaatgcattttttcgtcaagaagagtgacctttttgggttatgagattgatgac
accggagtacatccttctaaagagaaaatccgagatattttttga
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integrated database retrieval system
