Choristoneura fumiferana (eastern spruce budworm): 141430639
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Entry
141430639 CDS
T11020
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03082
ATP-dependent chromatin remodeling
cfum03083
Polycomb repressive complex
cfum04213
Longevity regulating pathway - multiple species
cfum04330
Notch signaling pathway
cfum04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141430639 (HDAC1)
03083 Polycomb repressive complex
141430639 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
141430639 (HDAC1)
04350 TGF-beta signaling pathway
141430639 (HDAC1)
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
141430639 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfum03036
]
141430639 (HDAC1)
Enzymes [BR:
cfum01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
141430639 (HDAC1)
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
141430639 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
141430639 (HDAC1)
BRAF-HDAC complex
141430639 (HDAC1)
REST complex
141430639 (HDAC1)
SHIP complex
141430639 (HDAC1)
MiDAC complex
141430639 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
141430639 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
141430639 (HDAC1)
Chromatin remodeling factors
NuRD complex
141430639 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
141430639
NCBI-ProteinID:
XP_073947539
LinkDB
All DBs
Position
8:15678070..15692225
Genome browser
AA seq
485 aa
AA seq
DB search
MAMQPHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGRCVELVKRFGLPFLLVGG
GGYTIRNVSRCWTYETSVALGVEIANELPYNDYFEYFGPDFKLHISPSNMSNQNTPEYLE
KIKNRLFENLRMLPHAPGVQVQAIPEDAVNDESEDEDKVDKDERLPQSDKDKRITGDGEL
SDSEDEGEGGRRDNRSYRTPQPRKRPRLDKEPGQVKDEVKTEDSKDDLKNLSTIEEPKKE
VPNNP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggccatgcaaccgcacagcaagaagagagtgtgttactactatgatagtgacatcggt
aattactactatgggcaggggcaccctatgaaaccgcatcgtatacgtatgactcacaat
ttattgttgaattatggcctttacagaaaaatggaaatttatagaccacacaaagcgacc
gcagatgaaatgacaaagtttcactcagatgattatatcagatttcttcgatcaattcgg
ccagataatatgtcagagtacaacaaacagatgcaaagatttaatgttggtgaagattgt
ccagtttttgatggtctttatgagttctgtcaattatctgctggaggctcagttgctgct
gctgtcaagttaaataagcaggcttctgaaatctgcatcaactggggtggtgggcttcac
cacgctaaaaaatcagaagcttccggcttctgttatgtaaacgacattgtactgggaatt
cttgagctgttgaagtaccaccagagagttttatacattgacatagacgttcatcatgga
gatggagttgaagaagcattttacacaactgacagagtcatgactgtgtcattccataaa
tatggggagtacttccctggcaccggcgatcttcgtgacattggagctggaaaagggaag
tactatgccgtaaacattccgctccgtgatggaatggatgacgagtcatatgaatcaatc
tttgttcctattatctcaaaggtcatggagaccttccaacctagcgctgttgtgcttcaa
tgcggtgctgattctctaacaggcgacagattagggtgcttcaatttgacggtgcgaggg
cacgggcgctgcgtcgagctagtaaagcgattcggtcttccgttccttcttgttggtgga
ggaggctacaccattcgcaacgtatcccgttgctggacgtacgaaacttcagttgccctc
ggagtggaaatcgccaatgagctcccctacaatgattactttgaatactttggaccagac
ttcaaactacatatatcgcctagcaacatgtccaatcaaaacacgccagaatacttagag
aaaataaagaatagactctttgaaaatctgaggatgttaccacatgcacctggtgtgcag
gttcaggcaataccagaagatgctgtcaatgacgaatcagaagatgaagacaaagtggac
aaagacgagaggctaccacaaagtgataaggacaagcgtatcaccggcgacggcgaactg
tcggactccgaagacgaaggcgagggcgggcggcgcgacaaccgctcgtaccgcacgccg
cagccgcgcaagcgcccgcgactcgacaaggagcccggacaggtcaaggatgaagtcaaa
actgaagattcaaaagacgatctaaagaatttaagcaccatagaggaaccaaagaaagaa
gtcccgaataatccctga
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