Choristoneura fumiferana (eastern spruce budworm): 141430752
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Entry
141430752 CDS
T11020
Name
(RefSeq) LOW QUALITY PROTEIN: crossover junction endonuclease EME1-like
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03440
Homologous recombination
cfum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141430752
03460 Fanconi anemia pathway
141430752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfum03400
]
141430752
DNA repair and recombination proteins [BR:
cfum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
141430752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EME1-MUS81_C
SR-25
Motif
Other DBs
NCBI-GeneID:
141430752
NCBI-ProteinID:
XP_073947712
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All DBs
Position
9:133839..139445
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AA seq
447 aa
AA seq
DB search
MSISNISISSDDSETLSDYSNQREFNILRPDNAEACVDLTQEYVNQYEPSASPTYETEDI
LPAVQLSGTQVATLGSSRGVSATSVSSAATSSSGYGGSGSVASRRRSVEEEDKSKKKKAA
AEAKLAKKQKLAEDRLARQAVAEMNKVYKPGECMKYMQIELHPSLLGQWYCADLEREAAA
CGARVAPTPDLCDPALVLWSRRTPRGLTEIQGQMALSPSVQRARXALYVCACDAAAPLVR
ARSLAATIAHAKVLAGCPLTLVVHGVKDYFKSSNRRTVNSSRDVITEIELEMALTDLIVS
AGCDTAIVNTPNELALLVMQFTKAIAEEPHKKIKRNFDEKAEFYMRGDNKKCVPMDKDGN
GASRLWQQMIAVLPGSSLETSRSICGQYKSPLALFTELQSSDGANKLAELGVSRTGVPGA
KSRRLGPEFARKLRTLFTTEDGDVLLD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagtataagcaatataagtatttcatcagatgatagtgaaactttaagcgattatagt
aaccaaagagaattcaatattttgagaccagacaatgcggaagcatgcgtggacttaaca
caagaatatgtaaaccagtatgaaccaagtgcctctccaacctatgaaacagaagatata
ttaccagcagtccagctcagtggaacgcaggtggcaacactgggaagctcccgaggagtg
tcagccacctcagtcagctcagcagctacttctagctcaggatatggagggtcagggagt
gttgctagcaggcggagaagcgttgaagaagaagataaaagcaagaagaagaaggcagca
gctgaagcaaaattggccaagaagcagaagttagcagaagaccgattggctcggcaagca
gttgctgaaatgaacaaggtttacaaacctggagaatgcatgaagtatatgcaaatagag
ctgcacccgtctctcctgggccaatggtactgcgcagacttggaacgcgaggcggcggcg
tgcggcgcgcgcgtggcgcccacgcctgacctgtgtgaccccgcgctcgtcctgtggagc
cgtcggactccccggggactcaccgagatccagggacagatggcgctgtccccgtcggtc
cagcgtgcgcgcngcgcgctgtacgtgtgcgcatgcgacgcggcggcgccgctggtgcgc
gcgcgcagcctggccgcgaccatcgctcacgctaaggtgttggccggctgcccgctcacg
ctcgtcgtgcacggcgttaaggattacttcaaatcgtcaaaccgtaggactgtcaatagc
agtcgggatgtcatcaccgagatagaacttgagatggctttaacagatctcatagtgagc
gcgggctgcgatactgctatagtaaatactccgaatgaactggcgttactcgttatgcag
tttacgaaggctattgccgaagaaccacataagaaaataaaacgtaattttgacgagaaa
gcagaattttatatgagaggggacaacaaaaagtgtgtacctatggataaagatggtaat
ggggcaagtagattatggcaacagatgattgcagtgctgcctgggtctagtctagaaact
tctagatctatctgcggacagtataaatcgccgcttgctcttttcaccgagttacaatcg
tctgacggagcaaataaattagctgagcttggagtttcgagaacgggagtacctggagct
aaatcgcgtcgccttggaccagaatttgctaggaaattacgcactttattcaccactgaa
gatggagatgtactactggattga
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