Choristoneura fumiferana (eastern spruce budworm): 141431090
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Entry
141431090 CDS
T11020
Symbol
Ufd1
Name
(RefSeq) ubiquitin fusion-degradation 1-like isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141431090 (Ufd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfum03009
]
141431090 (Ufd1)
Ribosome biogenesis [BR:
cfum03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
141431090 (Ufd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
141431090
NCBI-ProteinID:
XP_073948188
LinkDB
All DBs
Position
9:complement(6641383..6646722)
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AA seq
305 aa
AA seq
DB search
MFQFGFNMFHEISRPFNMTYRCFSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYP
MIFKLTNKKTKRSTHCGVLEFVADEGKVYLPHWMMANMVMEEGALLQIESVSLPVATFSK
FKPLSEDFLDISNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIE
CDMNVEFAAPVGYKEEHTASPEAGPAAEDPAELMPEPSGFVAFRGEGNRLDGKKKKQVSE
SDSEPQPAQSRQPYVRGIPDYDYEIGTIRFMRNTRPASANEETPQEPFQAFKGEGFTLRT
AKSKN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagtttgggttcaacatgtttcacgaaatatcgagacctttcaacatgacctac
agatgtttctcagtatccatgctgcctggcaatgaacggcaggacgttgagagaggtggc
aaaataatcatgcctccttcagcactggagcagctgacgagactaaacattgaataccct
atgatcttcaaactgaccaacaaaaagacaaagcgatcaacacactgcggagttttagag
tttgtggctgatgaaggaaaggtgtatttgccacactggatgatggcaaatatggtgatg
gaggaaggggccttgctgcagattgagagtgtctcgcttccagttgccacattctctaaa
ttcaagccactatctgaagacttcttagacataagcaacccaaaagcagtacttgagaac
tgcctgcggaacttctcatgcctcacaacaggggatgtgattgccatcaagtacaactcc
aaggtttatgagctgtgtgtcctggagaccaagcctggaaatgctgtcatcatcattgag
tgtgatatgaatgtagaattcgcggcgccagtgggttacaaagaagagcacaccgcgagc
cccgaggccgggccggcggccgaggaccccgccgagctgatgcctgagccgagtggcttc
gtggcgttccgcggcgaaggcaaccggctcgacggaaagaagaaaaaacaagtcagcgag
agcgactcggagccacagccggcacagagtcggcagccttacgtacgcggtattccggac
tacgactacgaaatcggcacgattcggttcatgcgcaacacgcggcctgcgagcgccaac
gaagaaactcctcaggaacccttccaggcgttcaaaggagaagggttcacgctacgcact
gctaagtccaagaattaa
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