Choristoneura fumiferana (eastern spruce budworm): 141431110
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Entry
141431110 CDS
T11020
Symbol
kz
Name
(RefSeq) putative ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfum03009
]
141431110 (kz)
Enzymes [BR:
cfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
141431110 (kz)
Ribosome biogenesis [BR:
cfum03009
]
Eukaryotic type
90S particles
Helicases
141431110 (kz)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
ResIII
nSTAND3
AAA_19
WHD_HA2
T2SSE
Flavi_DEAD
AAA_30
ATPase
AAA_25
nSTAND_NTPase5
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
141431110
NCBI-ProteinID:
XP_073948217
LinkDB
All DBs
Position
9:7424195..7441674
Genome browser
AA seq
1190 aa
AA seq
DB search
MGKRVFNAKARQVVKTSIDNSKTNEIKLDFEKSEYGSGDASNILALPTKKRQTKVIKEKK
ETTRFLSKQQRKRLEKIVDKKKKKENRSALLESLTQVQASLDEVKQMTTISTVQTLGLRR
LTELKSAVPSQNADTSEKKFSSVAGAKKRLRLLKLDSADKKKKAKYDPNVVGLEQSSSDD
SSSESEIEEPEVVEEKSEIPNKVTDKNKDVIEITDEDQELQKNENAIVIEKLNEKGMKVS
RNQKEQSKVEVPLPVKEEVKKPVLEHPTIVIEVKRDPKIQVARLKLPILGEEQRIMELVN
ENEFLIVAGETGSGKTTQIPQFLYEAGYSEHKMIAVTEPRRVATVAMAARVGYELGLSSK
EVSYLMRFEGNVTKDTKIKFMTDGVLLKEIQTDFLLSKYSVVIIDEAHERSVYTDILLGL
LSRIVPLRRKRGNPLRLIVMSATLRIEDFTENARLFKEPPPVIKIDARQFPVTVHFNKNT
YSDYLKEAFKKTVKIHTRLPEGGILIFVTGQQEINYLVRKLRASFPYRKDVDYTKLINKK
KPISDEDAALDSEPEDIESDDDEVEKEMKRARKARKKIKKKAKELPKINLDDYDMPEDDG
QADLVGSDDDSDGHLSDSDAEEDTLAPIIKSCRQPLWVLPLFSMLSSAKQARVFENPPPG
ARLCIVSTDVAETSLTIPGIKYVVDSGKKKMRVYDHSTGASAWRIVWTSQASAEQRSGRA
GRTGPGHAYRLYSSAVFQHDCPAHHPPDLCRRPVDDLVLQMKCMGIDKVVNFPFPTAPDR
LQLRLAEKRLEVLGILEKPQISKRKDDEEVLKVTPLGKAVSAFPILPRYGKMLALSHQQN
LLPYTIALVSALTVQEVMSGKPDNWPATGHTQLLGDPGVLLRAVGAAEYAHVNGEEQLFC
AKHGIREKAIKEIRKLRKQLTSEINLSVANVDVTIDPSMKPPDDNQARLLRQLLLSGLGD
QVGRKIGLDEVKEGEDKRKFKYAYLCGDLEEPVHLHSESILRRTIPQWVVYQELYETGGE
GRRKMVMRNVTAIEPEWLPSYVPQLCHLGDPLTEPAPRFDEKTGRVKCHYKGTFGKAGWE
LPVVEIDFPDKIEKYRWFARFLLEGTVIPKLRKYSGSLLSPPSTMVKSWSKLQPRTEILL
KGLIAKRVGSKPELLDAWSEQSNYLLDEYLKWLPESAHNEVTLNWPPLKP
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagcgtgtgtttaacgctaaagctagacaagtggtcaaaacaagtatagacaac
agtaaaactaacgagatcaaacttgactttgaaaaaagcgaatatggttccggcgatgcg
agcaatatccttgctctgccgactaagaagcggcagactaaagttatcaaagagaagaaa
gaaacaacaagattcctttcaaaacaacagagaaagcgattagagaaaattgtcgacaag
aaaaaaaagaaggaaaatagatcagcacttctcgagtccctcacacaagtccaagcatct
ctggatgaagtaaaacaaatgactactatatccacggtacaaacccttggcttgcgcaga
ctcactgagttaaagtcggcggtaccttcacagaatgctgacaccagtgagaagaagttt
agcagtgttgctggagcaaaaaaacgactgcgccttctgaaactagacagtgcagataaa
aaaaagaaagctaaatatgatccaaatgtagttggcctagaacaatcatcatctgatgat
tccagttcagagtctgaaattgaagaaccagaagttgtagaagaaaaaagtgaaattcca
aataaagttactgacaaaaataaagatgtgattgaaatcactgatgaagatcaagagctg
cagaaaaatgaaaatgccattgtaattgaaaaattaaatgaaaagggcatgaaagtatca
agaaatcagaaggaacaaagtaaagtagaagtgcctttgccagttaaagaagaagtgaag
aaaccagtattagagcaccctacaattgttattgaagtgaagagagatcctaaaattcag
gtggctaggcttaaactacctattttgggtgaagaacagagaattatggagctggtaaat
gagaatgagtttcttattgttgctggtgaaactggcagcggaaaaacaactcaaatacct
cagttcctctacgaggcaggttactcagagcacaagatgattgcagtgactgagccacgg
agagtggccaccgttgccatggcagcgagagttgggtatgaactcggtctgagcagcaaa
gaggtttcatatctcatgcggtttgaaggaaatgttactaaggacacaaagatcaagttc
atgactgatggtgtcctactaaaagagattcaaacagatttcctactgagtaaatactct
gtggtcatcattgacgaggcacacgagcggagcgtctacacagacatattgctgggtctc
ctgtcacggatagtcccactcagaaggaagagggggaatccactcagactcatagttatg
tccgccacactcagaattgaggactttacggagaatgctaggttgttcaaagagcctccc
ccggttataaagattgacgccaggcagtttccagtaacggtgcacttcaacaagaatact
tatagcgattatttgaaagaagcgtttaaaaagacggtcaaaattcacacgcgactgcct
gagggagggatcttgattttcgtgacgggccagcaagagataaattatctcgttcgtaag
ctaagggcatcgttcccttaccgcaaagacgtggattacactaagctgattaataagaaa
aaaccaatcagcgacgaagacgccgccttagattctgagcctgaagatattgagtctgat
gatgacgaggtggaaaaagaaatgaagcgagcacgcaaagctagaaagaagatcaagaaa
aaggcgaaggagttgccgaagatcaatctcgatgactatgacatgccggaggatgacgga
caagccgatctggtgggcagtgacgatgacagtgacggacatttgagtgattcagatgca
gaagaagacaccctagcaccaataataaaatcctgccgccagcctctttgggtgctccca
ctcttttcaatgctgtcatcagcgaagcaagctagagtatttgagaatccgccgcccggc
gcgagactttgtatcgtcagtactgatgtcgctgagacttcgcttactatacctggcatc
aaatatgtcgtggatagcggaaagaagaagatgcgcgtatacgaccattcgaccggcgcg
agcgcatggcgcatagtctggacctcccaagcctccgccgagcagcggtccggccgggcc
ggccgcacgggtccgggccacgcctaccggctgtacagctccgcggtgttccagcacgac
tgtccggcgcaccatccgccggacctctgccggaggccggtcgatgacttggtgttacag
atgaagtgcatgggcattgataaggtggtgaacttcccatttcccacggcgcccgatcgt
ctgcagcttcgtttggcagagaaaagactagaagtattaggtattctagagaagccccaa
atcagcaagagaaaggatgatgaagaggtgttaaaagtgactccgcttggcaaggcggtg
tcagcgtttccgatactgccgcgctacgggaaaatgctggcactcagtcaccaacaaaat
cttctgccgtacaccatagcgcttgtttctgccctcactgtacaagaggtgatgtccggc
aaaccggacaactggccagcgactggtcacacgcaattactgggcgatcctggagttctg
cttcgagccgtgggcgctgctgaatatgctcacgtcaatggcgaggagcagctgttctgt
gctaaacatgggattagagagaaggccatcaaggaaatccgaaagcttcgtaagcagcta
acctccgagatcaatctaagcgttgccaatgtggacgtgaccatagacccaagtatgaag
ccacctgatgataatcaggcgagattgctaaggcagctgctgcttagtggcttgggagat
caggtcggaagaaagataggcctcgacgaagtcaaagagggcgaagataagcgcaaattc
aaatacgcttacctctgcggtgacttagaagaaccagtgcatcttcactcggagtccata
ctccggcgcaccatcccccagtgggtggtgtaccaggagttgtacgagaccggcggggag
gggcgccggaagatggtcatgaggaacgtgactgctatagagcctgagtggctcccaagc
tatgtgcctcagctgtgtcacttgggtgaccctctcacggagcccgctcccaggttcgac
gagaaaactggtcgcgtgaagtgccactacaagggtacattcggaaaagcgggatgggag
ctgcccgttgtggagatagacttcccagacaagatcgaaaagtacagatggttcgcccgt
ttcctcctagagggtactgtcataccgaagcttcggaagtactccggttccctgctgtcg
ccaccatcgaccatggtcaagagttggtccaagctccagccccgcaccgagatattgttg
aagggtctcatcgctaagcgagtgggcagtaaacctgaactcttggatgcgtggagtgaa
caatcgaactatttactcgacgaatatttaaaatggttgccagaatcggcgcacaacgag
gtaacattgaattggccacctcttaaaccataa
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integrated database retrieval system
