KEGG   Choristoneura fumiferana (eastern spruce budworm): 141431237
Entry
141431237         CDS       T11020                                 
Name
(RefSeq) methyl-CpG-binding domain protein 4-like
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cfum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    141431237
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cfum03036]
    141431237
   03400 DNA repair and recombination proteins [BR:cfum03400]
    141431237
Chromosome and associated proteins [BR:cfum03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    141431237
DNA repair and recombination proteins [BR:cfum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     141431237
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 141431237
NCBI-ProteinID: XP_073948425
LinkDB
Position
9:complement(10552960..10639616)
AA seq 238 aa
MAESEECISRFFQDGSYVAIEKSPNRMMSSPKSLDCSQDSSQNSIDEGDLLSLSSLTIEE
QEPIKISPFYNITPREMPLSPHYIFEEEFSTNPWAMLIATIFLTKTSGKTARPYIQAFFE
EYPTPYHVLNDCPASLEKFFNNLGLRKRGHTIWKLSYQFVSSKWRRASDLFGIGKYGEDA
YRIFCLGHTDLDPGDRYLKLYLDWLHQTDFLKECGVADSECVIEDPVLKYYRITLRDV
NT seq 717 nt   +upstreamnt  +downstreamnt
atggctgaatcagaagaatgcatcagtagatttttccaagatggctcctatgttgccatc
gaaaaaagtcccaacagaatgatgtcgtcaccaaaaagcctggattgctcccaagactcc
agccaaaattcaatcgatgaaggagacttacttagcttatcatcgctcaccattgaagaa
caagaaccaatcaaaataagccctttttacaatatcactccaagagaaatgccattatca
ccacactacatctttgaagaggaattttcaactaacccctgggcaatgttaatagcaaca
atcttccttacaaagacatcaggaaaaactgccagaccttacatacaggcatttttcgaa
gaataccccacgccttaccacgttttgaatgattgtcccgcgtccctagagaagtttttt
aacaacttgggcttaaggaaaagaggccatacaatctggaagttgagttatcagtttgtt
tcgtctaaatggcggcgagcgagcgatttgttcggcatagggaaatacggggaagatgcg
tacaggatattctgtttgggtcacacggatctggatcctggggatagatatctaaagctg
tacttggattggctgcaccagacggactttttgaaggaatgcggtgttgcggacagtgaa
tgtgttatagaggatccagttttaaagtactatagaattactttaagggatgtttaa

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