Choristoneura fumiferana (eastern spruce budworm): 141431274
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Entry
141431274 CDS
T11020
Symbol
gzl
Name
(RefSeq) godzilla E3 ubiquitin protein ligase
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfum04121
]
141431274 (gzl)
Enzymes [BR:
cfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141431274 (gzl)
Ubiquitin system [BR:
cfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141431274 (gzl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
zf_RING_Vps8_fungal
Prok-RING_4
Cortexin
zf-RING-like
Hemotin
VPS18_RING_C
Oxidored_q2
zf-RING_Vps41
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
141431274
NCBI-ProteinID:
XP_073948489
LinkDB
All DBs
Position
Z:complement(21174233..21190048)
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AA seq
447 aa
AA seq
DB search
MRMWGLVVACACCGLLGAARATVVVYTQTTPHSPMDEFDDQPAAFGAKVPDDGLRGRLVL
AAPRDGCGKLQPAPPPDNFTGKWIVLIARYNCSFDTKIRNAQAAGYGCAIVHNVNSTELD
TMTTENPLPVDIPSVFVNNITGEALAEYYLYTKGYYIMVNGAPFDINTQLLLPFAIVVAI
CLFIIMGLLIVKCVRDRQHARRRRLPSRALKKIPTCKFSKGDPYDTCAICLDDYVEGERL
RVLPCAHAYHSKCIDPWLTQSRRVCPVCKRRVFAAGERRPALSDSDSDDSREPLAPSAHR
PTQGGTFEPQRENPFVRAARFVTRQRQRQRRASRENEQQHDEESNSTHEEHAQNDDTQPL
IRPAATSMAARVPSWLERMRNAAPAPAPAPAPAAAPAPAPASAIALIVEAAAPLLHSADH
SINTESRGEIGVAALPAAQNPPPHITL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgtggggcttggtcgtcgcgtgtgcgtgctgcgggctgctcggcgccgcgcgc
gcgaccgtcgtcgtctacacgcagaccacgccgcactcgcctatggacgagttcgacgac
cagccggcggcgttcggcgcgaaggtgccggacgacgggctgcgcgggcggctggtgctg
gccgccccgcgcgacggctgcggcaagctgcagcccgcgccgcccccggacaactttacc
ggcaagtggatcgtgctcatcgccaggtacaactgcagtttcgacacaaaaatccgtaac
gcgcaagcagcgggctacggttgtgctattgttcacaacgtcaactccacagagctcgat
actatgacaacagaaaacccgttgcccgttgatatcccgtcagtgtttgtcaacaacatt
accggcgaggcgcttgccgaatattatctctacaccaaaggttattatataatggtgaac
ggagcgccatttgacatcaacacccagctcttactgccattcgctattgtcgttgccatc
tgccttttcataataatgggattattgatagtgaagtgcgtgcgcgaccggcagcacgcg
cggcggcggcggctgccctcgcgcgcgctcaaaaagatcccgacctgcaagttcagcaag
ggcgacccctacgacacctgcgccatctgcctcgacgactacgtggagggcgagcgactg
cgcgtgctgccctgcgcgcacgcgtaccactcgaagtgcatcgacccgtggctgacgcag
agccggcgcgtgtgcccggtgtgcaagcggcgcgtgttcgcggcgggcgagcgccggccc
gcgctctccgactccgacagcgacgactcgcgcgagccgctcgcgcccagcgcccacagg
cccacgcagggcggcacgttcgagccgcagcgagagaacccgttcgtgcgcgcggcgcgc
ttcgtgacgcgccagcgccagcgccagcgccgcgcctcccgcgagaacgagcaacagcat
gacgaagaaagcaactctacacatgaggaacatgctcagaatgacgatacgcagcctctg
attcggccggcggcgacgtcgatggcggcgcgtgttccttcgtggctggaacgtatgcgt
aacgccgcgccggcgccggcgcccgctcccgcgcccgctgccgcgcctgcgcccgctccc
gcatctgccatcgcgctgatcgtggaggccgccgcgccgctgctccactcggccgaccac
tccatcaacaccgagagccgaggcgagatcggcgttgcggcactcccggctgcccagaac
cccccacctcatatcactttatga
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