Choristoneura fumiferana (eastern spruce budworm): 141431324
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Entry
141431324 CDS
T11020
Symbol
Pop4
Name
(RefSeq) ribonuclease P/MRP subunit POP4
KO
K03538
ribonuclease P protein subunit POP4 [EC:
3.1.26.5
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141431324 (Pop4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfum03009
]
141431324 (Pop4)
03016 Transfer RNA biogenesis [BR:
cfum03016
]
141431324 (Pop4)
03029 Mitochondrial biogenesis [BR:
cfum03029
]
141431324 (Pop4)
Enzymes [BR:
cfum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
141431324 (Pop4)
Ribosome biogenesis [BR:
cfum03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
141431324 (Pop4)
Transfer RNA biogenesis [BR:
cfum03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
141431324 (Pop4)
Mitochondrial biogenesis [BR:
cfum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
141431324 (Pop4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P-MRP_p29
CAF1
Motif
Other DBs
NCBI-GeneID:
141431324
NCBI-ProteinID:
XP_073948565
LinkDB
All DBs
Position
9:12932162..12933709
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AA seq
211 aa
AA seq
DB search
MSSIKKYSESEQAVFKFLEANVPKSDKVNIESELKKDFLLAKKKSKQGKKKKTSTKKIRT
LTRKDKKALGFYEIPRNSVKYEDLLAMHEMWIQYASQMLELHKPLPDTNSKSWEQFTQTL
YKSDFHGSYLSVVRSKCPSYVGKSGICIMDTKNTFKLLSKDSVVTTVPKFSSVFEMRIKN
VAVTLFGKHLCVRPAERSTKKVKSQLHPDLI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccataaaaaaatatagtgaaagtgagcaggctgtattcaaatttttagaagca
aacgttcccaaatcagacaaagtcaacattgaatcagagttaaagaaagacttcctactt
gcaaaaaagaagagcaaacaagggaagaaaaagaaaaccagcacaaagaaaatcaggacc
ttgacgagaaaagacaaaaaagccttgggtttttatgaaatacccagaaatagcgttaaa
tatgaagatttgcttgcaatgcacgaaatgtggatacaatacgcaagccaaatgttagaa
cttcacaagccactaccggatactaacagtaaaagttgggaacagtttacccaaactctt
tataaatcagactttcatggaagttacctcagtgttgttcgctccaaatgtccaagctat
gttggtaaaagtggaatttgtataatggatacgaaaaacacatttaagttactgtcaaaa
gatagtgtggtgactactgtgcctaagtttagttctgtttttgaaatgcggatcaagaat
gtggcagtgactttgtttggcaaacacttgtgtgtgcggcccgcggaaaggtctaccaaa
aaagtgaaaagtcaattgcaccctgacttaatatga
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