Choristoneura fumiferana (eastern spruce budworm): 141431417
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Entry
141431417 CDS
T11020
Symbol
ct
Name
(RefSeq) homeobox protein, cut isoform X1
KO
K09313
homeobox protein cut-like
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfum03000
]
141431417 (ct)
Transcription factors [BR:
cfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
141431417 (ct)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
UPF0242
DUF4407
Matrilin_ccoil
Fib_alpha
HTH_Tnp_ISL3
SseC
Motif
Other DBs
NCBI-GeneID:
141431417
NCBI-ProteinID:
XP_073948688
LinkDB
All DBs
Position
9:15722003..15907859
Genome browser
AA seq
1353 aa
AA seq
DB search
MHPTGAASLPAPEAEVQAMHSMDWLFKKERIYLLAQFWQQRATLAEKEVTTLKEQLATTS
PIQASVPPKTNGSHEPRDQETRIDRFSPEIKEEKDEEDKMEMARSNSARSSPQGGLESEL
AAKEKEIAQLVEDVRRLQASLAALQEAHAQQLQRLEERLDEKKQHIARLEARLDNQRDYD
DVKREIRRPSQAGPDLDPRHFVPFRDSIPRPAQPYRHHLSNMLRSMDLRDATERAERKPE
PLRSPAAPAPRDDDERERSSERRETGGEDWPSTPPLNNNTTHHNNNPPLPLPPPSPFRFE
EHRPYRFADDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANTNLDTLHIS
RRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDE
AAVMLLKSLIPKKVGSKEGNMGPGFGRGEGEGDERLAHILTEASHLMKTPSQPNNDDSRS
NDDSNSPRTQCLSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVDDMRH
NRDGFPGMFPPFFSGGMPPHMERPPEDLRMALEAYHRELAKIQPGGNIPNLHNLPGMPPF
PNLLALQQQAMQQAQNQHINGSGAIQDLSLPKDKNAKINGITDSDKDKPMDAEEAIRHAG
SAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDYNNSAAASPLQRMASITNSLI
SQPTNPTHHTPAQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGES
VLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDHAVHKLVASQYKIAPEKLMR
TGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLGGHGHLAHLAPPAGLLLTP
PGFPPHHAVTLPPLDVKERKPPTHAPPAMRPLHQHISPSVYEMAALTQDLDTQTITTKIK
EALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNID
RLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTTGAPSAKKQRVLFS
EEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPP
AREQAAAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLLPP
DEAKDQASGLDLSMPLKREPDGDDFEDDDVESNLGSEDSMDDGESKTEPKAASTPARSSR
RKPAAPQWVNPDWQDEKKRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPAREASPPAP
ARTPLSPRAPLTSPDVLPDDKIKAEADDDRWEY
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgcacccgacaggcgccgcgagcctgcctgcgcctgaggcggaggtgcaagctatgcac
tccatggactggctcttcaagaaggagaggatatatctactcgcgcagttctggcaacag
cgggccaccttggctgaaaaagaagtgacgaccctcaaggaacagctcgcgaccaccagc
cccatccaagcgtccgtgcctccgaaaaccaatgggtcccacgaacccagagaccaggag
acgaggatagaccggttcagtccggagatcaaggaagagaaagacgaggaggacaaaatg
gagatggcaaggagtaactctgccaggagtagccctcagggggggctggagagcgagctg
gcggctaaagagaaagagatcgcgcaactcgtggaagacgtgcggagactgcaggcgtcg
ctggcggcgctacaggaggcgcacgcgcagcagttacagcggctggaagagaggctcgat
gagaagaaacagcacatagcgcggttagaagcgcggctggataaccagagggactatgat
gatgtaaagagagagatcaggaggcccagccaggcggggcccgacctcgacccgaggcac
tttgtcccattccgggattcgatcccgcgtcctgctcagccatatagacaccacttgagc
aacatgctccgttctatggaccttcgagacgcgacggaaagagccgaacgcaaacccgag
ccgcttcggtcgcccgctgcgcccgcgccgcgcgacgacgacgagcgagagcgaagcagc
gaacgacgcgagacaggtggcgaggactggccgagcacgccgcccctcaacaacaacacg
acacatcataacaacaatcctccgctgccgctgccgccgccgagcccctttcgcttcgag
gagcaccggccgtaccgtttcgctgacgacatgggcccgttaccccccggcgctctcgtc
gggaggctcggcgattccctcatccccaaaggagaccccatggaagcgagactgcaagaa
atgctgcggtataacatggacaaatatgcgaatactaacctagacacgctccatatcagc
cgacgggtgcgggagctgctgtccgtccacaatataggacagaggctgttcgctaagtac
gtccttggactctcccagggaaccgtgtcggagctcctatcaaaacccaagccttgggat
aaactcaccgaaaagggaagagactcgtaccggaagatgcacgcttgggcgtgtgatgag
gccgctgtgatgctgctcaagtcactcattcctaaaaaagttggttcgaaggaaggcaac
atgggcccagggttcgggcgaggggagggggagggtgatgagcgactagcccacatcctg
actgaagcctcccacctcatgaagacccccagccagccgaacaatgacgactcgaggagt
aacgacgactcgaactctccccgcactcagtgcctctcaccattctctaataaggactcg
agtcaaaacagaagactgaaaaaatacgagaatgacgacatcccccaggagaaggtggtc
cgcatttaccaggaggagctggcgaagattatgacccggagagtggacgacatgcgacac
aaccgcgacggcttccctggaatgtttccaccttttttcagcggcggcatgcccccacac
atggagcgaccgcctgaggacctccggatggcgctagaagcatatcacagggagctcgcc
aagatccagcctggtgggaacatccctaacctccacaatctcccaggaatgccgcccttc
cctaaccttctggctctacagcagcaagccatgcagcaagctcagaaccagcacataaac
ggctctggagcaatccaggacctttctcttccaaaagacaagaatgccaaaattaatggt
ataactgatagtgataaagataagccaatggatgctgaggaggctataaggcacgcgggg
agcgcgttttccctagtcaggccgaagttagaaccggggcagcagtcaacagggtcttcc
gcgtcgagcccgcttggcaacgctatcctacctccagctataactcccaacgaagactat
aataattcagcagcagccagtccgctgcaacgaatggcttcgataaccaacagtctgatc
tctcaaccgaccaacccgacccatcacacgccagctcagcgctccatgaaagcggtcctc
cccccaatcactcaacagcaattcgatctctttaacaacttaaatacggaagacatcgtc
agaagagtgaaagaagcactaagtcaatactccatcagccaaagactgttcggtgaatcc
gtgctaggattgtcgcaggggtcggtcagtgacctcctggcgaggccgaagccctggcac
atgctgacgcagaaggggcgggaacccttcatcaggatgaagatgttcttggaagacgac
cacgccgtccacaaactagtggcgtcgcagtacaaaatcgcgccggagaaattgatgagg
accggaaactatagcggagcacctccatgtccgccaaacatgaacaagccgatgcctccg
acgcagaagatgatctccgacgcgacatccctcctcagcaaaatgcagcaggaacagctg
ctgggcgggcacgggcacctggcgcacctggcgccgcccgccggcctgctgctgacgccg
cccggcttccccccccaccacgccgtcacgctgccccccctcgacgtcaaggagcgcaag
ccccccacgcacgcgcctcccgccatgcgccccctccaccaacacatctcccccagcgtc
tacgagatggccgcgctcacccaagacctcgacacgcagaccatcacgacgaaaattaag
gaagcgttactcgccaacaacatcgggcagaagattttcggtgaagccgtgctaggactg
tcgcaggggtccgtgagtgaactcctttccaaacccaagccctggcatatgctcagtata
aaaggtcgggagccgttcattcgcatgcagctgtggttgagcgacgcgcacaatatcgac
cggctgcaggcgttgaagaacgagcggcgcgaggccaacaagcggcggcggtccagcggg
cccggccaggacaactcctcggacacctcctccaacgacacctccgagttctaccactcg
agctcgcccggcccgaccacgggcgcgccttccgccaagaagcagcgcgtgctcttctcc
gaggaacagaaggaggccctgcgactcgctttcgcgctggatccgtaccccaacatgccg
accatcgagttcctcgcggcggagctcgggctgtcgacgcggaccatcaccaactggttc
cacaaccaccgcatgcggctgaagcagcaggcgccgcacgggctgccggcggagcccccg
gcgcgcgagcaggccgccgcgcccttcgacccagtgcagttccggctgctcctcaaccag
cggctgctggagctgcagaaggagcgcatggggctcgcgggtgtgccgctgccctacccg
ccctacttcgccgccaactccaacctggcggcgctgatcgggcgcggcctcctcccgccc
gacgaagcgaaggaccaagcctcgggcctcgatctctcgatgccgctgaagcgcgagccc
gacggcgacgatttcgaggacgacgacgtcgagagcaatctcggctccgaggactcgatg
gacgacggcgagtcgaagacggagccgaaggcggcgtcgacgccggcgcgctccagccgg
cgcaagcccgccgcgccgcagtgggtcaaccccgactggcaggacgagaagaagcggaac
cccgacgaggtcatcatcaacggggtctgcgtcatgcggagcgacgacttccggcgagag
gcggaggagacggtgcgcgtggagccgtcgccggcgcgcgaggcgtccccccccgcgccc
gcgcgcacgccgctctccccgcgcgcgcccctcacctcccctgacgtcttgcctgatgac
aagatcaaggcggaggcggacgacgaccgatgggagtactag
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