Choristoneura fumiferana (eastern spruce budworm): 141431429
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Entry
141431429 CDS
T11020
Name
(RefSeq) LOW QUALITY PROTEIN: cholesterol transporter ABCA5-like
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141431429
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfum02000
]
141431429
Transporters [BR:
cfum02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
141431429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
R1_ABCA1
AAA_30
Motif
Other DBs
NCBI-GeneID:
141431429
NCBI-ProteinID:
XP_073948704
LinkDB
All DBs
Position
9:1790444..1849135
Genome browser
AA seq
1758 aa
AA seq
DB search
MIERHVVASDGRDSPASTEQLTKCEKGPGTPDCVAMGSRLRGPAGTRPPARFWPQLWATT
VRNLLLKKRDTRKTLAEVLVPLYSLGVLIFLKMLVPNPNFPEVTKPGRMLQLHYDAFPEN
HSVAVVADWLNDNGTVAFLEEINEILLESNQQTIRWVRYNDTTDLNDAYHRDAPNFPIAV
IFHSDPAAFGEPLRYTIRTNPSSSATPSTRTLYTSPAKCRERTASKGDWSRGGQLIPLSE
MHREDTCPVLQYYYSGFLAMQTLIDFTKIKLDTGTAFPPPRVELRQFPKRQHTGDWLVIF
RVIMPMYMVMTLSQFITYLLMFVVGEKEKKIREGMRIMGLKDSVYWLSWFLIYAVFVTVL
SVVSTVLLFTLKVFQHSSYILIFLLMLLFGFTIITFAFMLTPFFDKARTAGILGSFAVNL
MSGLYFIQVFVSDADSLAFWFVSLISSSCYALAMDKALVLDMAGVGVTWENLWSGPGVPF
GGSLIMMAVDTVLYALIAYWLDAVIPSEYGINQKPWFCLLPSYWIGSRRGRVSAVHFHSN
GDAAHNKDIEPVPRELQDKEAIRIVGLQKSFRHCRRAEIKGIPRKRHSEVINKAMVDVGL
SEQAGVFSKHLSGGQKRKLSIAIACIGDPKIIILDEPTAGVDPVSRRQTWRILQRAKRGK
VLLLTTHFMDEADILGDRKAVISKGRVRCAGTSLFLKNKFGIGYHLTLVLDGACREHQIT
RLVRGHVPRAEKARRHGRELSYILPHYAVHLFPPLFQAIEHEIKDKTNRLGITSYGVSMT
TLEEVFLSLEGENAEEIEAVEGVSSVKLVRARALSRSLSLQSKTLSYQELNDKDNQKTTS
LPTPPASHALHSTTHGVEHVKVTPTAPVSVDTLGELVKTSPSCWRTFCALVYIRMVRMIR
DPYKLYVMIFMPIISCALGLYIKSRQIVFFRMQPLKLDPYAYFNKTPVALFSEQNNTREL
WDLKSALETLGASPVIGYDGNFSSLLDMENFGAFSVGDSLIPYGIIKAYYNTTFTHGLPI
IINLLDNSIFRILMQTTGQLESFRPIEVLAHPFQQTEQQEEFNVGNVICAIFMGMIFALV
PVTLAVDIVYDREIKAKNQLRVNGLSMSMYFLTYFTILIFIMIITSIGVLLLVIVNDIPS
LTNGSAITMLSFLLVLYAPCAILFNTCLSYVFDKMDSAQSIMPNVTTWVGVIPFVLVAVV
DTFKWGSDIAFWLHLIFSFLNVLYIPYAIIYYVDRVYLTCNLRGVCATPALGSYFTAEVW
VLIVAMVFHVPVCGAALLAADRLKSGGSLCKKRRSEAEESLDEAEAEAGGEAGEDEDVRR
ERRRVAAILQHKTKAVPALVVHNLRKEFKVRGTGEGGCCGPSEGARKAGVARLSLAVEGG
EVFGLLGHNGAGKTTTMKIITAETRPTCGSVMLSGQNVCDSQASAFQVLGYCPQHDALWK
NVTIREHIECYAAIRGVSKADTPKIVDAYLSGLQIMEHANKNAEECSGGTRRKLSFALAM
VGGPRVVLLDEPSTGMDPRSKRFLWDTILASFQGKKGAILTTHSMEEADALCSRVGIMVK
GGLRCIGSTQHLKNLYGAGYTLEMKIGQAYQKSTLEAESMSPSPLRSTENSPSLGEADEG
NSRTASVCAEGSVEVDVEPEHETVDVSIHTPLVAGTPLRHQTHHRTESSGGVSAEACIAM
VSQVFPAAVLEENFADRLVFSVPQSSVSSLARCFQQIEDAKEKLNIVEYSFSQTTLEQVF
LKFAQSESHDRDLDQKAD
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgattgaacgccatgtcgtcgcaagtgacggtcgagattcgccggccagcaccgaacag
ctaacaaaatgcgaaaaaggccccggcacgccggactgcgtggcgatgggtagccggcta
cgcgggccggcgggcacgcggccgccggcgcgcttctggccgcagctctgggccaccacc
gtgagaaacctgctgctgaagaagcgggatacacgaaagaccttggctgaggtgctagta
ccgctctactcgctgggcgtcctaatattcttgaagatgctcgtccccaacccaaacttc
ccggaggtcacgaagccaggccgtatgctgcagctgcactatgacgcttttccggaaaac
cactccgtcgctgtcgtcgctgattggctgaatgacaatggaactgtggccttcctcgaa
gagatcaacgagatcctgctagagtccaaccagcagaccatccgctgggtccgctacaac
gacaccacggacctcaacgacgcctaccaccgcgacgcgcccaactttcctatcgccgtc
atcttccactcggaccctgccgccttcggggaaccgctcagatacacaatccgcaccaac
ccatcaagctcagccacaccctccacccggactctctacacttccccagccaagtgccgt
gagcggactgcctccaagggagattggtcacggggcggtcagctgatcccactgtcggag
atgcaccgcgaggacacgtgcccggtgctgcagtattactactccggattcctagcgatg
cagactttgattgatttcacgaagattaagctggacacaggcaccgccttccccccgcct
cgtgtggagctccgccagttcccaaaacgccaacacacgggcgactggctggtcatattc
agggtcatcatgcctatgtacatggtgatgacacttagccagttcatcacctatttgttg
atgttcgtcgtcggcgagaaggagaagaagatcagggagggaatgaggatcatggggcta
aaggattcagtttactggttatcatggttcttgatatatgcagtcttcgttaccgttctc
tcagtcgtcagtacggttctactcttcacattgaaggtgttccagcattcatcgtatatt
cttatctttttgctgatgctgctttttggattcaccattattactttcgcgtttatgctc
actccgttctttgataaagccaggacggcaggtatcttaggcagctttgctgtgaacctc
atgagtggtctctacttcatccaagtcttcgtatccgacgctgactcgctcgccttctgg
tttgtctcccttatcagctccagttgctacgctcttgccatggacaaggctttagtcctg
gatatggctggcgtaggagtgacgtgggagaacctgtggagcgggcccggcgtgcctttt
ggcggcagtctcatcatgatggctgttgacactgttctgtatgcgctgatcgcttattgg
cttgatgccgtcatacctagtgaatatggtataaaccaaaagccgtggttttgtttgctg
ccatcttattggataggcagtcggcgcgggcgcgtgtctgcagtgcattttcattccaat
ggcgatgcagctcataataaggatattgaacctgtaccaagggaactccaagacaaagaa
gcaattcgcatcgtgggactccagaagtctttcaggcactgtcggcgagcagaaatcaag
ggaatccctcggaaacgtcatagtgaagtcatcaacaaagccatggtggatgtcggtctt
tccgagcaggcaggagtcttctcgaaacacctctccggtgggcagaagcggaagctcagc
atcgccatagcttgcattggtgaccctaagataataattctggacgagccaacggcaggc
gtggaccctgtgtcccggagacagacgtggaggatcctgcagcgagccaagcggggcaag
gtgttactgctgaccactcacttcatggatgaagccgatatcctgggggacaggaaagct
gtcatcagcaagggccgggtgaggtgtgctggaacctcgttgtttttaaagaataaattt
ggaatcggatatcatctaacactggtgctcgatggagcttgccgcgagcaccagatcacg
cgtttggttcgcggacacgtgcctcgagcagagaaggcgcgccgccacggccgagagctg
tcctacatcctaccacattacgccgtgcatctgttcccaccactcttccaagccatcgag
cacgagataaaagacaagaccaaccgactggggattacaagctacggcgtgtccatgacg
acgctagaggaggtgttcctgagcctcgaaggcgagaacgctgaagagatagaagcagtc
gaaggggtgtcttcggtgaagctcgtgagggctcgggcgttgtcgcggagtctgtcgctg
cagagcaagactcttagttaccaggaactcaatgacaaggataatcagaagacgacatcg
ctgccaaccccgcccgcgtctcacgcgctacactccaccacgcacggagtggaacatgtc
aaggtgaccccgacggcgcctgtgtccgtggacacgctgggcgagctggtgaagacgagc
ccgtcgtgctggcgcacgttctgcgcgctggtctacatccgcatggtgcgcatgatccgc
gacccttacaagctctacgtcatgatcttcatgcctatcatatcatgcgctctcggcctc
tacatcaagtcccggcagatagtcttcttccggatgcagccactcaaattagacccttac
gcatacttcaataagaccccagttgcgctgttcagcgagcagaacaacaccagagagctg
tgggatctgaagagtgctttggagaccctaggagcttcgcctgtcattggctacgatggc
aacttctccagccttctcgacatggagaacttcggagctttcagcgtgggggacagcttg
atcccctatggcatcatcaaggcctattacaataccacattcacccacggcctacctatc
atcatcaatttactggacaatagtatatttaggatcctcatgcagaccaccggtcagttg
gaaagcttccgccccatcgaggtgctggcccatccgttccagcagacggagcagcaggag
gagttcaatgtggggaacgtcatctgtgccatctttatggggatgatcttcgcactggtg
cccgtcacgctggctgttgacatcgtgtatgatagagagataaaagctaagaatcagctg
cgggtcaatggcctgtcgatgagcatgtacttcctaacctactttaccatccttatcttc
atcatgatcattaccagcatcggagtactgctattggtaatagtcaacgacatcccaagc
ctaaccaacggctcggccatcacaatgctttccttcctcctcgtgctgtacgcgccgtgc
gccatcttattcaacacgtgcctctcctacgtgttcgacaagatggactccgcgcaaagc
atcatgcccaacgtcaccacgtgggtcggcgtcataccgttcgtgctggtcgctgttgtc
gatacctttaagtggggtagtgacatcgctttctggctgcacttaatattcagttttctg
aatgtcctgtatataccttacgcaatcatctactacgttgatagggtatacttaacatgc
aacctccgaggggtctgcgcgaccccagcactgggcagctacttcacggcggaggtgtgg
gtgctgattgtggccatggtgttccatgtgcccgtctgcggagcggcgctcctggctgct
gaccgcctcaagtcaggaggatcgctttgcaagaagcgtcgcagcgaagcggaggagtcg
ttggacgaagcggaggcggaggcgggcggggaggcgggggaggacgaggacgtgcgccgc
gagcgccgccgcgtggccgccatcttgcaacacaagaccaaggcggtgcccgcgctggtc
gtgcacaacctccgcaaggagttcaaagtgcgcggcacgggcgagggcgggtgctgcggg
cccagcgagggcgcgcgcaaggcgggcgtggcgcgcctgagcctcgccgtggaggggggg
gaggtgttcggcctgctcggacacaacggcgccgggaagaccaccaccatgaagatcatc
acggccgaaactaggcctacttgtggctcggtgatgctgagcggccaaaacgtctgcgac
agccaggcgtcggcgttccaagtgctgggctactgcccgcagcacgacgctctatggaag
aacgtcaccatccgcgagcacatagagtgctacgcggccatcaggggcgtcagcaaggct
gatacgcccaagatagtagacgcgtatttaagcggtctccagataatggagcacgcgaac
aaaaacgcggaggagtgttcgggcggcacgcggcggaagctgtcgtttgcgctggccatg
gttggggggccccgggtggtgctattggacgagcccagcaccggcatggacccgcgctcc
aagcggttcctgtgggacaccatcctggccagcttccagggtaaaaagggtgctattctg
acaacacattccatggaagaggctgatgctttatgttctagagttggaattatggttaaa
ggtggtcttaggtgtattggttcgacgcaacatttgaagaatttgtatggtgctgggtac
acgttagagatgaagataggccaggcttatcagaaatcgacattagaggcagagtcgatg
tctccttcaccactgcgatctactgagaattcaccgtcgttaggagaggctgacgaaggt
aattcgcgcaccgcttctgtgtgcgccgagggctctgtggaggtggacgtggagcccgag
cacgaaacagtggatgtgagcatccacacgccgctggtcgcaggcacgccgctgcggcac
cagactcatcacagaacggagtcgtccggcggcgtgagtgcagaagcctgcatagctatg
gtcagccaggtgttccctgcggccgtgctggaagagaacttcgcggaccggctcgtgttc
tccgtgccccagtcgtctgtgtccagcttagcgcgctgcttccagcagatcgaggatgcg
aaagagaaactgaacatcgtcgagtacagctttagccaaacaacactcgaacaagtattc
ctcaagttcgcgcagtccgagagccacgacagagatttagaccaaaaagccgattaa
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