Choristoneura fumiferana (eastern spruce budworm): 141431435
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Entry
141431435 CDS
T11020
Name
(RefSeq) LOW QUALITY PROTEIN: protein strawberry notch-like
KO
K26273
protein strawberry notch
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfum03036
]
141431435
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
141431435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_4
SBNO
AAA_34
Helicase_C
Motif
Other DBs
NCBI-GeneID:
141431435
NCBI-ProteinID:
XP_073948713
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All DBs
Position
9:2403513..2454442
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AA seq
924 aa
AA seq
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MCTTAIKDSNTLKTTEAGRVHRGERLPLFTSGPDCIQLARYLGVGAMEIVAMDMKLRGMY
IARQLSFHGVSFKIEEVPLTDAFRDTYDKSVALWVEAMQRFTEAAELIDAEARMKKTMWG
QFWSAHQRFFKYLCIAAKVHHAVVTAREAVKCGKCVVIGLQSTGEARTLDQLERDDGELS
DFVSTAKGVFQSLVEKHFPAPDRGRINRLLGLEAPQKLAPHPAPRPALPAARNGADDAHT
SKRKLTARQQVNMAAKRARGGSSSDEFIRGSXDEAEAESADERRRSDSESDSNPFRAGSG
SDSDTEPWMRKKNRSRRRRTRXTKKKPSTTQDKIENMFERKNNVAPXPTVTVTAPAGXSL
TGTPVGTNGLYLGPARNQPPPRXAIERACSMKEELLAAIERLAKRLPPNTLDQLVDELGG
TENVAEMTGRKGRVVQTEDGQILYESRSEADVPLETLNLTEKQRFMDGEKDVAIISEAAS
SGISLQSDRRARNQRRRVHITLELPWSADRAIQQFGRTHRSNQVNAPEYIFLISDLAGER
RFASTVAKRLESLGALTHGDRRATETRDLSQFNIDNKYGRTALEAVMKAIMKYETPLVPP
PRDYNGDFFQDIASALVGVGLIINSESAPGVLSLDKDYNNMSKFLNRILGMPVDLQNRLF
KYFTDTLTAVMEQAKRSGRFDLGILDLGSAGECVRRVRCVRYLRRHATGTAPVQLHTVHS
ERGMEWTDALEKHSLLTGPKEGFYLSLTARNNKYTAVLCCATAQPHARAKLTKKEQMYQI
YRPNTGLQLRLESLAEIEKKYKRVTAEEAETSWRAQHEASRRVCSHAYWRASCRNAANCE
VGLRLRTYHVLSGSVLAVWARVEGVLAQRSQLNKMQVVRIKTDEGLKIVGTMIPKNCVEP
LKETLASDAVNVTEQVFDTTDTLK
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtgtacgacagctatcaaggacagcaatacactaaagacgactgaggcggggcgtgtg
cataggggggagcgactcccgctcttcacctcaggccccgactgcattcaactcgcgcgc
tatctgggcgtgggcgctatggagatcgtagccatggacatgaagctgcggggcatgtac
atcgcgcggcagctgtccttccacggggtgtccttcaagatcgaggaggtgcctctcacg
gacgccttccgggacacctacgacaagtccgtggcgctgtgggtggaggcgatgcagcgg
ttcacggaggcggccgagctgatcgacgcggaggcgcgcatgaagaagaccatgtggggg
cagttctggtcggcgcaccagcggttcttcaagtacctctgtatcgccgctaaggtacat
cacgcggtggtgacggcgcgcgaggcggtcaagtgtggcaagtgcgtggtgatcggtctg
cagagcaccggcgaggcgcgcacgctcgaccagctcgagcgggacgacggcgagctcagc
gacttcgtgtccaccgccaagggcgtgttccagtcgctggtcgagaagcacttcccggcg
cccgaccgcggccgcatcaaccggctgctcgggctggaggcgccgcagaagctggcgccg
caccccgcgccgcgccccgcgctgcccgccgcacgcaacggcgccgacgacgcacacacc
agcaagaggaagctgacagcgcgacagcaagtgaacatggcggccaagcgcgcgcgcggc
ggctcgtcctccgacgagttcatccgcggctccngagacgaggcggaggcggagtcggcc
gacgagcgccgccgctccgactccgagagcgactccaaccccttccgcgccggttccggc
tccgatagtgacacagaaccctggatgagaaagaagaaccgctcaagaagaagaagaacg
cgtnncaccaagaagaagccttccacgactcaggacaagatcgagaacatgttcgagagg
aaaaacaacgtcgcgcccnaacccacggtcaccgtgacggccccggcgggcnacagcctc
accggcacgccggtcggcaccaacggactctacttaggtcctgcgcgcaaccagccgccg
ccgcggntcgcgatagagcgcgcctgcagcatgaaggaggagctgttggccgccatcgag
cgcctcgccaagcggctgccgcccaacacgctcgaccagctggtggacgagctcggcggc
accgagaacgtggctgagatgacagggcgcaaggggcgcgtggtgcagacagaggacggg
cagatcctgtacgagagccggtcggaggccgacgtgccgctggagaccctcaacctcacc
gagaaacagcgcttcatggacggggagaaggacgttgccattatatcagaagccgcctcc
agcggtatctctctacagagcgatagaagggcgcggaaccagcggcggcgtgttcacatc
acgctggagctgccgtggtccgccgacagagccatacagcagttcggtcgcacccaccgg
tcgaatcaagtgaacgcgccggaatatatcttcctgatctctgacctggcgggcgagcgc
cggttcgcgtccaccgtggccaagcggctcgagtcgctcggtgcgctcacgcacggcgac
cgccgcgccaccgaaactagggatctcagccagttcaacatcgataacaaatacggtcga
acggcgctggaggcggtgatgaaagcgataatgaaatacgagacgccactcgtgccgccg
cctcgggactacaacggcgatttcttccaggatatcgctagtgctctggttggtgtaggg
ctcataataaacagcgaatctgcgccgggcgtgctctctctagacaaggattacaacaat
atgtccaagttcctgaacaggatactgggcatgccggtagacctgcagaacaggctcttc
aaatacttcaccgacacgctcaccgccgtcatggagcaagcgaagcgcagcggtcgcttc
gacctgggcattctggacctgggcagcgcgggagagtgcgtgcggcgcgtgcgctgcgtg
cgctacctgcggcgacacgccaccggcaccgcgcccgtgcagctgcacaccgtgcactca
gagcggggcatggagtggacagacgcgctagagaagcactctctcctgacaggccccaag
gaaggcttctacttgtcgctgacggcgcgcaacaacaaatacacggccgtgctgtgctgt
gccaccgcgcagccccacgcgagggccaagcttaccaagaaagagcagatgtatcagata
tacagacctaacacgggtctccaactccggctggagtctctggctgagatcgagaagaaa
tacaagcgcgtgacggccgaggaggccgagacgtcgtggcgtgcgcagcacgaggcctcg
cgccgcgtctgcagccacgcctactggcgcgccagctgccggaacgccgccaactgcgag
gtgggcctgcggctgcgcacgtaccacgtgctgtcgggctcggtgctggcggtgtgggcg
cgcgtcgagggcgtgctggcgcagcgctcgcagctcaacaagatgcaggtcgtgcgcatc
aagaccgacgaggggctcaagatcgtcggtacgatgatcccaaagaactgcgtggagccc
ctcaaggagacgctggcttctgacgccgtgaacgtcaccgaacaggtgttcgacaccacc
gacacgctcaagtga
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