Choristoneura fumiferana (eastern spruce budworm): 141431522
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Entry
141431522 CDS
T11020
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K26244
transcriptional regulatory protein PHF12/RCO1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfum03036
]
141431522
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
141431522
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD
PHF12_MRG_bd
PHDvar_NSD
PHD_2
FHA
Prok-RING_1
PHD-1st_NSD
C1_1
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
141431522
NCBI-ProteinID:
XP_073948810
LinkDB
All DBs
Position
9
Genome browser
AA seq
877 aa
AA seq
DB search
MSNVSYDLDTSGGLMPLIKALIKPPDEEVSTQKSKKSQHPYYKRPGKGHNHDSCDACGEG
GDLICCDRCPASFHLGCYDPPLDENDIPAGLWLCKECAGSDKEQPPSSRSSRAQSPADQK
PDDKKIRSLRNRSNSTKKMEEDNKKEEKEKEKEPEKELTPMEILVRAARIMNPRQFELPR
EMRVPCPFPGTDKDNGNGKNGNGSLVTVDAMGCVPLPARSCFVCRGTCKAAPLLACDYCP
LLFHQDCLDPPLTALPTGRWMCPNHVEQYIDWKLVNSVSATERVALWERFSAPVDQHAIK
VDFIRRARNQRPAFRSKVPVGVRGRVRVPDMVRGHYARPPPLLPSRREYLRCANVLKKQS
ATSDYSASSDDDAPAPVCLRLECARHAPPPPPPPPPAPLRPATNNDADDDLKAISEHKTY
SSSSSQSDSDTDYESAPKRRRAASPATALRRAVDDQLSKLDHHLVKLLAWQRLQQILVGE
QCYGPWSRLPLAAETEALLHAAIPRARLAKHGFKHVALPSELLSRAERERIARAVWGAAP
PPPRPHAPAPSHAPHRAAACPVLRPGRLGLGDGLGPAVPMRLSRLTFGADCWAWATGWGR
RLGLGDGLGPAVPMRLSRLTFGADCWAWATGWAAVPMRLSRLTFGADCWAWATGWAGGAD
ASVASDVRRGLLGLGDGLGPAVPMRLSRLTFGADWRWLCCDVCRLGLGDGLGPAVPMRLS
RLTFGADSGCDVVLDPAQCRYVSPRHATVFYDEVTHHFELINYSEXGSRVDGVLYAMDAA
PRAPASPPRDGDARAQAVRDVVSRRATSAPRQRLNGSLCSLPAACRCAPAADAPGAWEGS
ALVDHGALLQFGCLMFVFSVADARPFPYECPNENPAL
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgtaagctatgacctcgacacgtcgggtgggcttatgccgcttatcaaggca
ttgataaagcctccagacgaagaagtaagcacccagaaaagtaaaaagtctcaacaccca
tactataaaaggcctggcaaaggtcataaccacgactcctgtgacgcgtgcggggaaggc
ggggaccttatttgttgcgatcgttgcccggcaagcttccatcttggttgctatgacccg
ccgctcgatgagaatgacataccagctgggctatggttgtgcaaggagtgcgcaggctcg
gacaaggagcagcctcctagcagccgcagcagccgcgcgcagtcccctgctgaccagaaa
cctgacgacaagaagatcaggtctcttcgcaatcgctccaactccaccaaaaagatggaa
gaagacaacaaaaaagaagagaaggaaaaagagaaagagcccgagaaggagctgactccg
atggagatcctggtgcgggctgcgcgcatcatgaatccgcggcagtttgagctgccgcgg
gagatgagggtcccctgcccgttccctgggactgataaagataacggcaacggcaaaaac
ggcaacgggtccctggtgacagtggacgcgatgggctgcgtgccgctgccggcgcgctcg
tgcttcgtgtgccgcggcacgtgcaaggcggcgccgctgctcgcctgcgactactgcccg
ctgctgtttcaccaggactgtctggatccgccgctgacggccctgccgaccggtcgctgg
atgtgtccgaatcacgtggaacagtacattgactggaagctggtgaattctgtgtctgcg
acggaacgcgtggcgctttgggagcgcttctcggcgcccgtggaccagcacgccatcaaa
gtggacttcatccggcgcgcgcgcaaccagaggcccgccttccggtcgaaggttccggtg
ggtgtacgcggtcgcgttcgcgtgccggacatggtccgcggacactacgcgcgcccgccg
ccgctgctgcccagccgccgcgagtacctgcgctgcgccaacgtcctgaagaaacagtcg
gccacgagcgactactcagcgtcctctgacgacgatgcgccggcgccggtctgcctgcgg
ctggagtgcgcgcggcacgcccccccgcccccgcccccgcccccgcccgcgccgctccgc
cccgccaccaataacgacgctgacgacgacctcaaggccatctccgaacacaagacgtac
agttcgtcgagctcccagtcggactctgacacggactacgagtcagcgccgaagcgtcgg
cgggccgcgtcgcccgccaccgcgctacgccgcgccgtggacgaccagctcagcaaactg
gaccaccatctggtcaagttgctggcttggcagcggctgcaacagatcctggtgggcgag
cagtgctacgggccgtggtcgcggctgccgctggccgctgaaacggaggcgctacttcac
gccgccatcccgcgcgcgcgcctcgccaagcacggcttcaagcacgtggcgctgccatcg
gagttgctgtcgcgcgcggagcgtgaacgcatcgcgcgcgccgtgtggggcgccgcgccc
cccccgccgcgcccccacgcgcccgccccctcgcacgcgccgcaccgcgccgccgcctgc
cccgtactacggcccggcaggctgggcctgggcgacgggctggggccggcggtcccgatg
cgtctgtcgcgtctgacgttcggcgcggactgctgggcctgggcgacgggctggggccgg
cggctgggcctgggcgacgggctggggccggcggtgccgatgcgtctgtcgcgtctgacg
ttcggcgcggactgctgggcctgggcgacgggctgggccgcggtgccgatgcgtctgtcg
cgtctgacgttcggcgcggactgctgggcctgggcgacgggctgggccggcggtgccgat
gcgtctgtcgcgtctgacgttcggcgcggactgctgggcctgggcgacgggctggggccg
gcggtgccgatgcgtctgtcgcgtctgacgttcggcgcggactggcgatggttgtgttgt
gacgtgtgcaggctgggcctgggcgacgggctggggccggcggtgccgatgcgtctgtcg
cgtctgacgttcggcgcggactcgggctgcgacgtggtgctggaccccgcgcagtgccgc
tacgtgtcgccgcgacacgccaccgtcttctacgacgaggtgacgcaccactttgagctg
atcaactactccgagntgggctcccgcgtggacggcgtgctgtatgctatggacgcggcg
ccgcgtgcgcccgcctccccgccgcgcgacggggacgcgcgcgcgcaggccgtaagggac
gtggtcagccgccgcgcgaccagcgcgccccgccagaggttgaacgggtccctgtgttcc
ctgccggcggcgtgccgctgcgcgccggcggcggacgcgccgggcgcgtgggagggctcc
gcgctggtggaccacggcgcgctgctgcagttcggctgcctcatgttcgtgttcagtgtg
gcggacgcccgccccttcccctacgagtgccccaacgagaaccccgccctctag
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