KEGG   Choristoneura fumiferana (eastern spruce budworm): 141431794
Entry
141431794         CDS       T11020                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141431794
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cfum03041]
    141431794
   04121 Ubiquitin system [BR:cfum04121]
    141431794
Spliceosome [BR:cfum03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    141431794
Ubiquitin system [BR:cfum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    141431794
SSDB
Motif
Pfam: SART-1 HIND HA
Other DBs
NCBI-GeneID: 141431794
NCBI-ProteinID: XP_073949073
LinkDB
Position
10:complement(516972..527986)
AA seq 617 aa
MGSKKHKKESKKKKHRSRSRSPLEGEERERKRHRKHKDRKKDRSPDVEEVPVDSHLARAP
DDARSRSSSAERDRRARRDRVRDDPHNSNSTQQSRELSYEREESPEAGGAGGAGGAAVSG
AGAESLSIEDTNRLRAKLGLKPLEVHEKPEEDGKFKDDLGEFYHKPAANLATQRRSDKIR
ERLEERRERRQIEQKLQTKLLTEGSDDEDISAWVNKSRDLEKQKKEAAKRAAMLDEMDEV
FGVSALVEEEQRGDRAAAYGAHSLAGLRVAHDLDALAEERDTVLTLADKDVLADDAEDVL
VNVNIVDDERYKKNIESRKKAKAGYQAYDDEAELEAAALGFQKPVLSKYDEEIDKEKAER
ERGFVLGDEAGIEAQRFRDMMRQERLRGGGGPDKRLESLRLPQLQLACDYLTEAELNAKF
KKTKRRGKIRKKAKHEPIDVEDYDAAAAPLDTDDTDVKMDQLKAELVVDEEEVEPDSELQ
TALARARRLRQAADAHGDIIPKVEEILERVKEEPLVEAAEGGAMVLDACAEFCRTLGDIP
TYGQAGNRDHTQEILDYEREEMEVVPEHSGSGSGAWLSVDVGAEGGALAAAGGGLGALGG
GAGALVAEPALGAGVAG
NT seq 1851 nt   +upstreamnt  +downstreamnt
atgggttcaaaaaaacataaaaaggagtcaaagaagaagaagcacaggagtaggtcgcgc
tctcctttggagggagaggagcgcgagagaaaaaggcatagaaaacacaaggatcggaag
aaggaccgctcacccgacgttgaggaggtcccggttgactctcacctggcgcgtgcgccg
gacgacgcgcgcagccgcagcagcagcgccgagcgcgaccgccgcgcgcgccgcgaccgc
gtgcgcgacgacccgcacaactccaacagcacgcagcagtctcgcgagttaagctacgag
cgcgaggagtctcccgaggcgggcggcgcggggggcgcggggggcgcggccgtgtccggc
gccggcgccgagagcctctccatcgaggacaccaaccgcctgcgcgccaaacttggcctc
aagccgctcgaggtgcatgagaagccagaagaggacggcaagttcaaggatgacctgggc
gagttctaccacaagccggcggccaacctggcgacgcagcgccgcagcgacaagatccgc
gagcggctggaggagcgccgcgagcgccgacagatcgaacagaagttacaaacgaagctc
ctcacagaaggctccgacgatgaagacatctctgcctgggtcaacaagtcgcgggacctc
gagaagcagaaaaaggaagccgctaagagggcggccatgctggacgagatggacgaggtg
ttcggcgtgtcggcgctggtggaggaggagcagcgcggcgaccgcgccgccgcctacggc
gcgcactcgctcgccggcctgcgcgtggcgcacgacctcgacgcgttggcggaggagcgc
gacacggtgctgacgctggccgacaaggacgtgctcgccgacgacgccgaggacgtgctc
gtgaacgtcaacatcgtcgacgacgaacggtacaagaagaacatcgagtcccgcaagaaa
gccaaggcgggctaccaggcgtacgacgacgaagccgagttggaagcggccgcgctcggg
ttccagaagcccgtgctctctaagtacgacgaggagattgacaaggagaaagcggagcgg
gagcgtggcttcgtgctcggggacgaggccggcatagaggcgcagcgcttccgggacatg
atgcggcaagagcgcctgcgcggcgggggcggacccgacaagcggctggagtcgctgcgg
ctgccgcagctccagctcgcctgcgactacctcaccgaggccgagctcaacgccaagttc
aagaagaccaaacgacggggcaagatccgcaagaaggccaagcacgagcccatcgacgtg
gaggactacgacgcggccgccgcgccgctcgacaccgacgacactgacgtgaagatggat
cagctgaaggcagagctggtggtagacgaggaggaggtggagcccgacagcgagctgcag
acggcactggcgcgcgcgcgccgcctgcgacaggccgccgacgcgcacggagacatcata
cccaaggtggaggagatcctggagcgcgtgaaggaagagccgctggtggaggcggcggag
ggcggcgccatggtgctggacgcgtgcgcagagttctgccgcacgctcggggacatcccc
acctacgggcaggccggcaaccgcgaccacacgcaggagatactggattacgagcgcgaa
gagatggaagtggtcccggagcattccgggtcgggcagcggcgcgtggctgtcggtggac
gtgggcgcggagggcggcgccttggcggcggcgggggggggcctgggcgccttggggggc
ggcgcgggcgcgctggtggccgagccggcgctgggcgcgggcgtggcgggc

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