Choristoneura fumiferana (eastern spruce budworm): 141431946
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Entry
141431946 CDS
T11020
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cfum01009
]
141431946
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfum03021
]
141431946
Enzymes [BR:
cfum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
141431946
Protein phosphatases and associated proteins [BR:
cfum01009
]
HAD phosphatases
Fcp/Scp phosphatases
141431946
Transcription machinery [BR:
cfum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
141431946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
141431946
NCBI-ProteinID:
XP_073949389
LinkDB
All DBs
Position
Z:3196100..3198102
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AA seq
560 aa
AA seq
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MDTPTVKAKKKPTKFEELSKEQIRQAILKKRESNAKAQSIVENLLEKNISEAYFVECLPE
INQSHFDDIIEERSIIHLCGYPLCDKPISERDIPKQKYRISVKTNKVYDITGRKNFCSNR
CYNSAMYIKQQMLTSPLWFREYEDIPKFHLLPPESTGCMGQEIDVSIIDKVKIIERPAFT
SVNDFAKTSLNEMGDNNADSEETETKAVSLPSRNTDKPVIKNEDNTRPNPSTETKESSMK
IEDKIKPVANPLSIIGEIVERPERKIDPILVNKPVEKPAAQTKKIHSKKQPVLSAITIEV
EKSLAQWFTLDTMLFLLGEEKVREMVTDKGECIKEYMNNYATSIFHRSNSYDQYQALCRK
LNMLELEDKKFNSKTVQREMKPLPDYSIIQEESKRMQLKVKAYLDGSTDIPEPEQESNSS
NDETLTQLPLVDRNAQNALRRRIVCQHLNKVLPDLMRSLGLLSFSVTADVKLLVNTFKLS
ANNIMFKPIQWTLIAIIMLKLLSLRDRRLEHSMEQPMAFQHMQLLLLSYKHDGGYVDRLI
SWLTDLDRLLDTNDTHLTIE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggacactccgacggtcaaagctaagaagaaaccaacaaagtttgaggaattgtcaaaa
gagcaaataaggcaagcgatactaaagaaacgcgagagcaatgccaaggctcaaagtatc
gtagagaatttgttggagaagaacatttccgaggcttacttcgtcgaatgcctgcctgaa
atcaaccagagccatttcgatgacatcatagaagagcggtcgatcatccatctatgcggt
taccctttgtgtgacaaaccaatatccgagagagacataccgaaacaaaagtacagaata
tcggtgaagacgaacaaagtgtacgacattacgggcagaaagaatttttgcagcaaccgc
tgctataattccgcaatgtatatcaaacaacaaatgctcacaagccccctgtggttcagg
gaatacgaggatatccctaagttccatttacttcctccggaatcgactggctgcatggga
caagagatagatgtgtcaatcatcgacaaagtaaagataatagagcgcccagcgttcaca
tctgtcaatgattttgcaaagacaagcttaaatgaaatgggtgacaataatgcagactca
gaagaaactgaaacaaaagcagtgtctcttcccagtaggaatacagataaacctgttata
aaaaatgaggataatacaagaccaaaccccagtacagaaactaaagaaagctcaatgaag
attgaagataaaataaaaccagtagcaaatccattgagcatcataggagagattgttgag
aggcctgaacgtaaaatagatcccatactagtgaataaaccagtagagaagcctgcggca
cagactaaaaagatccattcaaaaaagcaaccagtgttgagcgcaataaccattgaagtg
gaaaaatctttggcacagtggttcacactggacactatgctgtttttactgggtgaagag
aaggtaagagaaatggtaacagacaaaggtgaatgcatcaaagaatacatgaacaattac
gctacaagcattttccataggtcaaatagctatgatcagtatcaagccctgtgccgcaag
ttgaatatgctagaactagaagacaagaagtttaattccaaaacggtgcagagagaaatg
aagccacttccagactattctataatacaagaggagagtaaacggatgcaattaaaagtc
aaagcatacttagatggaagcacagacataccagaacccgagcaagaatctaactctagc
aatgacgagactttaacacagctgccgctagttgataggaatgcccagaatgcgcttcga
agacgcatagtctgccagcatttgaataaagtgttaccagatctaatgcggtcactaggt
ctgcttagtttctctgttactgctgatgtaaaactacttgtgaacacgtttaaactaagt
gcaaataatattatgtttaagcctattcagtggactttgatagctattattatgctgaaa
ttgttgtcattgcgtgacagaagactggagcacagtatggagcaaccgatggctttccag
catatgcagttgttgttgcttagttataagcacgatggaggctatgtggatcgtttgatt
tcatggctgactgacttagacaggttgctggatactaatgacacgcatttgacgattgag
tga
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