Choristoneura fumiferana (eastern spruce budworm): 141431959
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Entry
141431959 CDS
T11020
Symbol
U2af38
Name
(RefSeq) U2 small nuclear riboprotein auxiliary factor 38
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141431959 (U2af38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfum03041
]
141431959 (U2af38)
Spliceosome [BR:
cfum03041
]
Complex A
U2 snRNP components
U2 related factors
141431959 (U2af38)
Complex B
141431959 (U2af38)
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GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
141431959
NCBI-ProteinID:
XP_073949372
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All DBs
Position
10:complement(6805924..6810505)
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AA seq
228 aa
AA seq
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MAEYLAAIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK
SADGSHLVVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKF
RREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPI
SRELRRYLYSRRKGGKRSRSRSRERRPRRSRSRERRREPPRNSRSGRY
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtatttagctgctatttttggtactgaaaaggacaaggtcaactgctccttt
tatttcaaaataggagcatgtcgccatggggaccgatgctctcgtattcataataaacca
acattctcgcaaacagtgctgctacagaatctttatgtgaatccccaaaactctgcgaaa
tctgctgatggcagtcatttggtggttgcgaatgtttccgatgaggaaatgcaggagcac
tatgacaatttctttgaagatgtttttgttgagtgtgaagacaaatatggagagattgaa
gaaatgaatgtgtgtgataacctgggtgaccacttagttggaaatgtctatattaaattc
cgccgtgaagaggatgctgagaaggcagtgaacgacctgaacaaccggtggttcggcggc
cggcctgtgtacgccgaactatctcccgtgacggacttccgcgaggcctgctgccgccag
tatgagatgggcgagtgcacgaggagtggcttctgcaacttcatgcacttaaaacctatc
tcgagggaacttaggagatacctgtactctcgtcgcaagggcggcaagcgttcgcgcagc
cgctcccgcgagcgccggccgcgccgctcgcgctcgcgggagcgccgccgcgagccgccg
cgcaactcgcgctcgggccgctactga
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