Choristoneura fumiferana (eastern spruce budworm): 141431970
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Entry
141431970 CDS
T11020
Symbol
mei-9
Name
(RefSeq) DNA repair endonuclease XPF mei-9
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03420
Nucleotide excision repair
cfum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
141431970 (mei-9)
03460 Fanconi anemia pathway
141431970 (mei-9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfum03032
]
141431970 (mei-9)
03400 DNA repair and recombination proteins [BR:
cfum03400
]
141431970 (mei-9)
DNA replication proteins [BR:
cfum03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
141431970 (mei-9)
DNA repair and recombination proteins [BR:
cfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
141431970 (mei-9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Rhodanese
Motif
Other DBs
NCBI-GeneID:
141431970
NCBI-ProteinID:
XP_073949397
LinkDB
All DBs
Position
10:complement(6987383..7000794)
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AA seq
893 aa
AA seq
DB search
MEAPKENDDQNEVPNFDIKFKLLEFEKQIFIDAFEKDALLILAKGLNYNGIISNLLWVYN
DPANLVLVLNSNDYEEKHFMEKFKLSPLPNLGTEREKAYLEGGVHFISTRILVVDLLKNR
VPVTNITGIIVLRAHTVLESCQEAFALRLYRQNNKTGFIKAFSNSPISFTFGYHQVEKVM
RAVFVTELFLWPRFHGTIIKCLKNRQAEVVELHVPLTSNMSHIQTCLLDIMNYTVKQLRS
INRTLDMQEITTENCISKKFHKILQSQLDCVWHQLSTRTKEYVQDLKVLRSMIIKLIHDD
AVSFYALVSKYRTPEYARVNSGWILLDSAEQLFRLAKNRVYNHKNEFDPEHSPKWKVLSD
LLLEEIPEEVKKKQKEGLNNTKILILCQDGRTCAQLNHFLTMGPNKYLFYTAFRRDLTIH
TVSSTYKNLKDTAPATSELEKEGVATKPDEDNKDVNKLEEEDTEESKTNYILTLTQVATQ
GDKKKSADVSMFEPISQIDNLDITQIELEKPIICIRTFKENGNSFSLEQCLENLRPEYII
LYHSDVAAVRQIELFESRKSNEESSCKVYFVVHDKTVEEQAYLTSLKREKQAFELLIQAK
SVMVVPSYQDGKTDEYFNLNEEDDSDAVDTRKAGGQQPREKQRVIVDMREFRSDLPALLH
KKGILIEPVTITIGDYILTPDICVERKSISDLIGSLNSGRLYTQCTQMCRNYSRPILLIE
FDQNKPFNLQGHFVVSTDISGADIQQKLQLLTIHFPRLKLVWSPSPYATAELFYELKQGR
KNPEIAAAIALGGDNTADDINYERYNILVHDFVQKLPGVTSKNMARIMNKGVSLDHLLTL
NKEELGQIIENKNEADTLYSVLHVKAKPADAGKDDKPFGKKKFTGKLFRSKKT
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggaagctcccaaagaaaacgacgatcagaacgaagtgccgaattttgacattaaattt
aaactactagagtttgaaaaacaaatcttcattgatgcttttgaaaaagatgctcttctt
atattggcaaagggactcaattacaatggtatcatttccaacttattatgggtttacaac
gatcctgccaacttagttcttgtgttgaatagcaatgattatgaagaaaaacatttcatg
gagaaatttaaactctctcctttgcccaaccttggcactgaaagagaaaaagcttacctt
gaaggtggtgttcactttatttcaacacggatattagtggtggacttattaaagaaccga
gttccagtcacaaacatcacaggcattattgtgctacgagctcacaccgtgctggagtcc
tgccaagaagcttttgccttgaggctatataggcagaataacaagactggctttataaag
gcattctccaactctcctatttcattcacatttggttaccaccaggtggaaaaggtcatg
cgcgcagtttttgtcacagagcttttcttgtggcccaggtttcatggcaccattataaaa
tgcctgaaaaacaggcaagcagaggtggtagagcttcatgtgcctctcacatccaacatg
agccacatacagacatgcctgctagacatcatgaactacactgtcaaacagctgcgaagc
atcaatagaactctcgacatgcaggaaataacaactgaaaattgtatttcaaaaaagttt
cacaaaattcttcaatctcagttggattgtgtatggcatcagctaagcacgaggaccaag
gaatatgttcaagacctcaaagtgctcagaagcatgatcatcaaacttatccatgatgac
gctgtctccttttacgcattagtcagtaaatataggacaccggaatatgctcgggttaat
tccggctggattctactcgattctgctgaacaactgtttagattggccaagaacagagtt
tataatcataaaaacgaatttgatccagaacattcacctaaatggaaagttcttagcgat
ttattactcgaagaaattcctgaggaggtgaagaaaaagcaaaaagaaggtttaaacaat
acaaaaatacttattctctgtcaagatgggcgtacgtgcgcccaactaaaccactttctt
acaatgggccccaacaaatacttattttacaccgcctttagaagggacctgacgatccat
actgtttcatcgacgtataaaaatctcaaagacactgcgcctgcgactagcgaattggaa
aaggaaggggttgctacgaagccggatgaagacaataaagacgttaataaattggaagaa
gaagacacagaagagtcaaaaacaaattacatcttaactctcactcaagttgccacacag
ggcgataagaagaaatctgcagacgtgagcatgtttgaaccaatttcacagatagacaat
ttagacataacccaaatagaactcgagaagcctataatatgcataaggacgttcaaagaa
aacgggaacagtttttctttagaacaatgcttggaaaatttacgtccggagtacataatc
ctgtaccacagcgacgtggcggctgtgcgacagattgagctgtttgagagccggaaaagt
aacgaggagtctagctgcaaggtctacttcgtggtccacgacaaaacggtggaggaacag
gcgtacctgacgtctttgaagagagagaaacaggcttttgagctgttaattcaagctaag
agtgttatggtcgtaccttcgtatcaagatggtaaaactgatgaatactttaatttgaat
gaggaagatgactctgacgctgttgacaccaggaaagcaggtgggcagcagccacgggag
aagcagcgagtcatcgtggacatgcgcgagttccgctccgaccttcccgctctactccac
aaaaaaggcattctcatagaacctgttaccatcaccataggagactacattcttaccccg
gacatttgcgtggagcgcaaatctatctcggacctgataggctcgctcaactcaggccgt
ctgtacacacagtgcactcagatgtgtcgcaactacagccgccctatactgctcatagag
ttcgatcagaacaaaccttttaatctacagggtcatttcgtggtatcgacagacatttcc
ggagcagacatccaacaaaagctgcagctactcactatacattttccgaggctcaagctc
gtgtggtctcccagtccctatgccaccgcggaactgttctacgaactaaaacaaggcaga
aagaatcccgaaatcgcggccgctatagctctcggcggagacaacacggctgacgacatc
aactatgagcggtacaatatcctggtccacgactttgtgcagaaactgcctggtgtcacc
tccaaaaacatggcccgaattatgaacaagggagtttcgttggatcacttgcttacgcta
aacaaggaggagctaggacagataattgaaaataaaaatgaagcagacactttgtactca
gtactgcacgtaaaagcaaaacctgccgacgccggcaaggacgataagccgtttggtaaa
aagaaatttacaggcaaattgtttagaagtaaaaagacgtaa
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