Choristoneura fumiferana (eastern spruce budworm): 141431971
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Entry
141431971 CDS
T11020
Name
(RefSeq) protein no-on-transient A-like isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cfum01009
]
141431971
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfum03021
]
141431971
03041 Spliceosome [BR:
cfum03041
]
141431971
Protein phosphatases and associated proteins [BR:
cfum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141431971
Transcription machinery [BR:
cfum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
141431971
Spliceosome [BR:
cfum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141431971
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
141431971
NCBI-ProteinID:
XP_073949402
LinkDB
All DBs
Position
10:7001560..7050725
Genome browser
AA seq
647 aa
AA seq
DB search
MQMHAMNHYGNQRGFGGPPQPQRQGGRRGNNRGGFRQTRFDNNGPNQRNPNQGQGGQRPS
NEPPKQAQQAAEKPPQQQQQQQPAQPVQAQPQKTEAPAQPNVQNVQKPPQNQPSQQNQQQ
PAPKPLMNIQTKPVESQDKVDKAVIDVDQPKPANQNMQQKNMNGGNFGGGNKQGGWQGGP
GNKHGGNFNQGGNFNQGGNYGQGNKPFGQKHGGPGGQGGQGGPPRNQQRPNNRGGSLMDG
KQPAQREEHMLANKLKDLVGPLVDLPPLDQSEVKFNGRSRLYIGNLTGDVTEEEIQALFA
PYGETAELFVNKEKNFGFIKVDYRVNAEKAKRELDGKMRNGRTLRVRFAPHNSAVRVKNL
PPFVSNELLYRAFEIFGKIERAYVKVDERGKSLGEGVVEYARKPSALAAIRNCTEKCFFL
TSSLRPVIVESFEEPDEFDGYPEKNLPKKHPEFLRAREYGPRFSELNSFEHEYGTRWKQL
HELHRQKEEALKKELSAEEEKLEAQMEYAKYEHETELLREQLRQREQDRERQKRSWEQAE
RAAEERREAERAQLLRQEEELSTRMRHQDDELRRRQQENTLFVQAQRLNSMLDRQEQGMF
DQQQPMDGGGFREQFDMPNRSYDDMPQNRGWEGPRQMDDFPNKRRRF
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgcacgccatgaatcattacggtaatcaacgaggttttggaggcccaccacaa
cctcaacgacagggcggtcgtcggggaaacaaccgaggtggattccggcagacgagattt
gataataacggccctaaccagagaaatcctaaccagggacaaggaggtcaacgccccagt
aacgagccacctaaacaagcccagcaagctgcagagaaaccaccacagcagcagcagcag
cagcagcctgctcaacctgtgcaagctcaaccgcagaagactgaggctcctgctcagccc
aatgtgcagaatgtgcagaagcctccgcagaaccagccttcacaacagaaccagcagcaa
ccagctcccaaacctctcatgaatattcaaaccaagcctgtggaatcacaggacaaagtt
gataaagctgttattgatgttgatcagcccaaacctgctaatcaaaatatgcagcagaag
aatatgaatggtggcaactttggaggaggcaacaaacagggaggctggcaaggtgggcca
ggaaataaacatggtggtaactttaatcagggaggtaattttaatcagggtggtaattat
ggacaagggaacaagcctttcgggcagaaacatggtggccctggaggacaggggggtcaa
ggtggtcctcctcgcaatcaacagcgccccaacaatagaggaggttctctaatggatggg
aagcaaccagcgcagagagaggaacacatgttggccaacaagttgaaggatctggttggt
ccattggttgatttaccccccttagaccagagtgaggtcaagtttaatggcagaagccgt
ttgtacattggtaatttaactggagatgtgactgaagaggaaattcaggctttgttcgct
ccttatggggaaacagcagaactatttgtgaacaaagaaaagaactttggatttattaaa
gttgattacagggtaaatgctgaaaaagctaagcgcgagttggacggtaaaatgaggaat
ggcagaacactgagagttagattcgcgcctcacaacagtgctgtgcgtgtaaagaatttg
cctccatttgtgtccaatgaactcctttaccgtgcttttgaaattttcggcaaaattgaa
agggcttatgtaaaggttgatgagagagggaaatctctgggagagggtgtcgtagagtat
gcccgaaagcccagtgccttggctgctattcgcaactgcactgagaagtgctttttcttg
acttcatctttgcgtccggttattgtggaaagctttgaggagcctgatgaatttgatggc
tatccagagaagaatttgccaaagaaacatcctgaattcctccgagctcgtgaatatggg
ccacgcttctccgagttgaacagcttcgagcatgagtatggcacaaggtggaagcagttg
cacgagctgcatcgccagaaagaggaggcccttaaaaaggagctctctgctgaggaggag
aagcttgaagctcaaatggagtatgctaaatacgagcacgagacagagttgttgcgcgag
cagctgcgtcagcgcgagcaggaccgcgagcgccagaagcgcagctgggagcaagccgag
cgcgccgccgaggagcgccgtgaggccgagcgggcgcagctgttgcgccaggaagaggag
ctctccacgcgcatgcgccaccaggacgacgagctgaggcgccgccaacaagaaaacaca
ctcttcgtgcaggctcagcgcctcaactccatgttggacagacaagaacagggcatgttc
gaccagcagcaacccatggatggtggaggcttcagagagcagttcgacatgcccaaccga
agttatgatgacatgccgcagaaccgcggatgggaaggaccgcgccaaatggatgatttt
ccaaacaaacgtcgtcgattctaa
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