Choristoneura fumiferana (eastern spruce budworm): 141431978
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Entry
141431978 CDS
T11020
Symbol
RpL40
Name
(RefSeq) ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03010
Ribosome
cfum04120
Ubiquitin mediated proteolysis
cfum04137
Mitophagy - animal
cfum04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
141431978 (RpL40)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141431978 (RpL40)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141431978 (RpL40)
04137 Mitophagy - animal
141431978 (RpL40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cfum03011
]
141431978 (RpL40)
04121 Ubiquitin system [BR:
cfum04121
]
141431978 (RpL40)
Ribosome [BR:
cfum03011
]
Ribosomal proteins
Eukaryotes
Large subunit
141431978 (RpL40)
Archaea
141431978 (RpL40)
Ubiquitin system [BR:
cfum04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
141431978 (RpL40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Ubiquitin_5
TBK1_ULD
Plexin_RBD
Dsc3_N
UBL_UBAC1
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
141431978
NCBI-ProteinID:
XP_073949413
LinkDB
All DBs
Position
10:7185875..7186869
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AA seq
129 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGTIEPSLRILAMKYNCDKMICRKCYARLHPRATNCRKTKCGHTNN
LRPKKKLKD
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtaaaaaccctcacggggaagactatcacccttgaggtggaggcttca
gacaccatcgaaaatgtgaaagccaagattcaggacaaggaaggcatccctcctgaccag
cagcgactgatctttgccggcaagcaactggaagatggccgtactttgtctgattataac
attcagaaggaatctactctccatttggtgctcaggcttagaggaggtaccattgagccc
tccctcaggattttggctatgaagtacaactgcgacaagatgatctgccgcaagtgctat
gcccgcctccatccccgtgcaaccaactgccgcaaaaccaagtgtggccacactaacaac
ctccgccccaagaagaagttgaaggattaa
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